Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0210 ATGGCTCATTCAGCTGAACCATCCTCATCTTTGAGCTTTACTTCATCTTCCCACTTATCGAATGGCTCTGGTAACCACAATTTATGTGCTTCTCATTGCCCTGATCCTGGACCTAACCTTGAAGCCATCAGTTTGAGTAAGCTTAGCTCTAATTTAGAGCAGCTTTTGATTGATTCTGATTATGATTACAGTGATGCTGACATAATTGTTGAAGGAATTCCGGTCCTTGTTCATCGATGCATTCTTGCCTCTAGAAGCAAGTTTTTTCATGAGTTATTCAAGAGGGAGAAAGGACCGCAAGAGAAGGAAGGCAGAATAAAGTATTTGATGAGTGATTTTTTGCCTTATGGTAAGGTTGGATATGAAGCCTTCCTCATTTTTTTGGGATATGTGTATACGGGGAAACTCAAGCCCTCTCCAATGGAGGTGTCAACATGTGTTGACAATGTATGTGCCCATGATGCTTGTCGGCCTGCAATTAATTTTGCTGTTGAGCTGATGTATGCATCTTCCATTTTTCAAATGCCAGAACTGGTATCACTTTTTCAGAGACGTCTTCTTAATTTTGTAGGGAAGGCTTTTGTGGAAGATGTTATACCAATCCTCATTGTTGCTTTCCATTGTCAACTGAGCCAACTTGTCACTGAATGCATTGATCGGGTGGCCCGATCAGACCTTGACTATGTCTCAATTGAGAAGGAGATACCCCTTGAACTCTCAGAAAAAATAAAATTACTTCGGCGCAACTCCCAGCATGATGCTGAAGATAATGCTTCATTGATGGATCCATTGTATCAAAAGAGAATCACTAGAATACACAAGGCATTGGACTCAGATGATGTTGAGCTTGTTAAACTTCTTTTAACTGAGTCTGATATAACTTTAGATGAAGCAAATGCTCTCCATTACGCTGCAGCCTACTGTGATCCTAAGATTTTTTCTGCGGTACTTGGTTTGGGTCTGACTGATGTCAATCTTCGGAATTCTCGAGGATATACCGTGCTTCATATTGCTGCCATGCGTAAGGAGCCTTCAATCATAGTTTCACTTCTTACAAAGGGGGCTCATGTGTCAGAATTGACTTTGGATGGTCAGAGTGCTGTAAGCATCAGCAGGAGGTTAACAAGGCCAAAGGATTACCACTCAAAAACAGAACAGGGGAAGGAAACAAACAAAGACCGAATGTGTATTGATGTTCTTGAAAGAGAAATGCTGAGAAATCCGATGTCTAGTGATGCCTTTATGTCTTTCCCAATAATGGGTGATGATCTGCAGAGGAAACTGCAATACCTTGAGAACAGAGTGGCATTTGCAAGATTGTTCTTCCCTGCGGAAGCTAAAGTTGCCATGGACATTGCAGAGGCTGAGACAAAAGGCTCGAGTGGGAATTTCAGGGAGGTTGATCTTAATGAGACTCCCATAATGCAAAACAAAAGACTTCTTTCAAAGGTGGAAGCCCTTATGAAAACAGTGGAGACGGGCAGACGATACTTTCCTCATTGCTCAGAAGTGCTGGATAAGTTCATGGAGGATGAGCTGCCTGATTTGTGTTACCTTGAGAATGGTTCTCAAGAAGAGCAGAGAATAAAGACAACACGTTTCATGGAGCTTAAAGACAATGTTCAAAAGGCCTTCAACAAGGACAAAGCTAACTTTTGCAGCTCTGGGATTTCTCCTTCATCCTCCTCATCATCTCTCAACAATCCTGTGCATAACAAGACAAGAAAAGTGTGA 1734 0.4175 MAHSAEPSSSLSFTSSSHLSNGSGNHNLCASHCPDPGPNLEAISLSKLSSNLEQLLIDSDYDYSDADIIVEGIPVLVHRCILASRSKFFHELFKREKGPQEKEGRIKYLMSDFLPYGKVGYEAFLIFLGYVYTGKLKPSPMEVSTCVDNVCAHDACRPAINFAVELMYASSIFQMPELVSLFQRRLLNFVGKAFVEDVIPILIVAFHCQLSQLVTECIDRVARSDLDYVSIEKEIPLELSEKIKLLRRNSQHDAEDNASLMDPLYQKRITRIHKALDSDDVELVKLLLTESDITLDEANALHYAAAYCDPKIFSAVLGLGLTDVNLRNSRGYTVLHIAAMRKEPSIIVSLLTKGAHVSELTLDGQSAVSISRRLTRPKDYHSKTEQGKETNKDRMCIDVLEREMLRNPMSSDAFMSFPIMGDDLQRKLQYLENRVAFARLFFPAEAKVAMDIAEAETKGSSGNFREVDLNETPIMQNKRLLSKVEALMKTVETGRRYFPHCSEVLDKFMEDELPDLCYLENGSQEEQRIKTTRFMELKDNVQKAFNKDKANFCSSGISPSSSSSSLNNPVHNKTRKV 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0210 577 SMART ANK_2a 296 326 IPR002110 GO:0005515
Mibi06g0210 577 SMART ANK_2a 267 295 IPR002110 GO:0005515
Mibi06g0210 577 SMART ANK_2a 330 359 IPR002110 GO:0005515
Mibi06g0210 577 FunFam Regulatory protein NPR3 38 222 - -
Mibi06g0210 577 Gene3D Potassium Channel Kv1.1; Chain A 39 222 IPR011333 -
Mibi06g0210 577 FunFam regulatory protein NPR3-like 264 404 - -
Mibi06g0210 577 ProSiteProfiles Ankyrin repeat profile. 330 362 IPR002110 GO:0005515
Mibi06g0210 577 Pfam BTB/POZ domain 62 180 IPR000210 GO:0005515
Mibi06g0210 577 MobiDBLite consensus disorder prediction 556 571 - -
Mibi06g0210 577 PANTHER REGULATORY PROTEIN NPR3 10 570 IPR044292 GO:0009862|GO:2000022|GO:2000031
Mibi06g0210 577 CDD BTB_POZ_NPR_plant 47 190 - -
Mibi06g0210 577 SUPERFAMILY Ankyrin repeat 266 371 IPR036770 -
Mibi06g0210 577 SUPERFAMILY POZ domain 49 188 IPR011333 -
Mibi06g0210 577 SMART BTB_4 64 190 IPR000210 GO:0005515
Mibi06g0210 577 Pfam NPR1/NIM1 like defence protein C terminal 372 564 IPR021094 -
Mibi06g0210 577 ProSiteProfiles BTB domain profile. 64 140 IPR000210 GO:0005515
Mibi06g0210 577 MobiDBLite consensus disorder prediction 556 577 - -
Mibi06g0210 577 Pfam Ankyrin repeats (3 copies) 273 358 IPR002110 GO:0005515
Mibi06g0210 577 ProSiteProfiles Ankyrin repeat region circular profile. 330 358 - -
Mibi06g0210 577 Gene3D - 264 405 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0210 Mibi-ChrMibi06 7202111 7206517 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mibi06g0210 NPR1_like_C 1.9e-80 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g0210 06 7202111 7206517 Mibi06g0210 06 7202111 7206517 ECH