Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0172 ATGGACCTTAAGCATAATATCCGTAATATGTCTGTAATTGCACATGTTGATCATGGAAAATCTACCCTCACTGACTTTCTTATGGCGGTCACTGGTATTATTGCACAGGAAGTTGCAGGTGATGTCCGGATCACTGATACCTGTCAAGATGAAGTAGAGTGGGGCATCATAATAAACTCTACGAGTATTTCTCTCTACTATGAAATGAGTGATGAGGCTCTCAAGAGCTTCAAAGGTAAACGCAATGGCAATGAGTACCTTATAAATTTTAAAGACTCCCCTGGGCACGTGGACTTCTCATATGGGGTCATAGCCACACTTCATATAACTGATGAAGCTCTATTGGTGGTAGATTGTATAGAAGGTGTTTGTGTCCAAACTGAAACTGTGCTTCTGCTAGCACTTGGAGAAAGAATTAGACTTGTTTTGACTGTGAATAAAATGGACAGGTGCTTCCTTGAGCTCCAGGTGGAACCAAACATTCAAAGGGTTATTGAGAATGCCAATGTGATCATGGCTACATATGAAGATTCCCTCATTGGTGATTGTCAAGTTAACCCAGAGAAAGGAATAGTTGCTACTTGCTTTTTCTGCTGGTTTGCATGGTTGGGCTTTCACCTTGATCAACTTTGCTAA 636 0.4104 MDLKHNIRNMSVIAHVDHGKSTLTDFLMAVTGIIAQEVAGDVRITDTCQDEVEWGIIINSTSISLYYEMSDEALKSFKGKRNGNEYLINFKDSPGHVDFSYGVIATLHITDEALLVVDCIEGVCVQTETVLLLALGERIRLVLTVNKMDRCFLELQVEPNIQRVIENANVIMATYEDSLIGDCQVNPEKGIVATCFFCWFAWLGFHLDQLC 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0172 211 Gene3D - 1 210 IPR027417 -
Mibi06g0172 211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 193 IPR027417 -
Mibi06g0172 211 Pfam Elongation factor Tu GTP binding domain 5 190 IPR000795 GO:0003924|GO:0005525
Mibi06g0172 211 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 211 IPR000795 GO:0003924|GO:0005525
Mibi06g0172 211 FunFam Translation elongation factor 2 1 211 - -
Mibi06g0172 211 PRINTS GTP-binding elongation factor signature 141 150 IPR000795 GO:0003924|GO:0005525
Mibi06g0172 211 PRINTS GTP-binding elongation factor signature 89 99 IPR000795 GO:0003924|GO:0005525
Mibi06g0172 211 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Mibi06g0172 211 PRINTS GTP-binding elongation factor signature 53 61 IPR000795 GO:0003924|GO:0005525
Mibi06g0172 211 PRINTS GTP-binding elongation factor signature 105 116 IPR000795 GO:0003924|GO:0005525
Mibi06g0172 211 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 193 - -
Mibi06g0172 211 TIGRFAM small_GTP: small GTP-binding protein domain 7 169 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0172 Mibi-ChrMibi06 6092207 6093141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0172 1 193 Eukaryotic Initiation Factors Gene Family AT1G56070 77.273 6.18e-97 298