Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0119 ATGTCTTCCTTCACTTTCCTGTACGAGATTTTAGGGATTCCGGCCGGAGCCTCCCATCAAGAAATTAAAGCTGCCTACCGGCGATTGGCTAGGGTTTGCCATCCCGATGTGGCGGCGATGGATCGGAAGGATTCTTCGGCCGATGACTTCATGAAGATTCACGCCGCCTATTCCACTCTGTCGGATCCTCAGAAGCGAGCCACTTACGATAGGAGCCTCTTCGTCCGCCATCAGAGGCCTTTGTCCACCGCGTCCTCGTTCTCCGGTTATGGTGGCCGGAACTGGGAAACGGACCAGTGCTGGAACAATCCTTGGTTTGTGGCATTGGGAAGATCTTGTATTCATTTGACCTGGAAAGACAGGGGAGCAATATCTCTTAAGGTTGTGGAGAATGTAGAAGATGCTAACTTTGTTTTAGCTCATGGTACTGAAGCCTTGGGGACTTCCTCTAGGGATGCACATGCTATGAGTCTTCAAGACCTTGAAGGAATATTGGACCTTTGTGCTTCCAAAGGAATTCCTATGGTGGTGGCTAATCCAGATTATGTAACAGTTTGGGCAAGAGACTTGCGTGTCATACCTGGTGAATATGTTTTACTTGTTATGACTTTGCATAAGAGCTTTAGAGTTTAG 633 0.4818 MSSFTFLYEILGIPAGASHQEIKAAYRRLARVCHPDVAAMDRKDSSADDFMKIHAAYSTLSDPQKRATYDRSLFVRHQRPLSTASSFSGYGGRNWETDQCWNNPWFVALGRSCIHLTWKDRGAISLKVVENVEDANFVLAHGTEALGTSSRDAHAMSLQDLEGILDLCASKGIPMVVANPDYVTVWARDLRVIPGEYVLLVMTLHKSFRV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0119 210 SUPERFAMILY Chaperone J-domain 4 76 IPR036869 -
Mibi06g0119 210 CDD DnaJ 8 62 IPR001623 -
Mibi06g0119 210 Pfam DnaJ domain 7 70 IPR001623 -
Mibi06g0119 210 ProSitePatterns Nt-dnaJ domain signature. 50 69 IPR018253 -
Mibi06g0119 210 PRINTS DnaJ domain signature 26 41 IPR001623 -
Mibi06g0119 210 PRINTS DnaJ domain signature 8 26 IPR001623 -
Mibi06g0119 210 PRINTS DnaJ domain signature 45 65 IPR001623 -
Mibi06g0119 210 Gene3D DnaJ domain 2 88 IPR036869 -
Mibi06g0119 210 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 7 101 - -
Mibi06g0119 210 ProSiteProfiles dnaJ domain profile. 6 73 IPR001623 -
Mibi06g0119 210 SMART dnaj_3 5 65 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0119 Mibi-ChrMibi06 3086385 3088515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0119 8 77 C2H2 Transcription Factor Family AT1G74250 43.590 2.09e-09 54.7