Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0087 ATGAAGGATACTGGTGATATTTCCTCTTGTTCCTGTCTAGATGATCGAGTTGATTCAGATTCTGGAGTGGATATGAGCTGCCAGTCAAATATTAAAAGTGTTGATGTTCCTGTATGCTTTACAACTGGAAACACATTCCAGGATCAAAGTCATCCTGGCTATGTGCAACCTGCTTTTGTTAGTGGATGGATGTATGTCAATGAAAATGGGCAAATGTGTGGTCCCTATATTCAGGAGCAACTATATGAAGGATTAACTACTGGTTTCTTGCCAGTTGAGCTTCCCGTGTATCCTGTGATGAATGGCACATTAATGAACCCTGTACCGTTGAATTACTTCAAACAGTTTCCTGACCATGTTTCCACAGGGTTCGTATATTTGACCATGAGTAGCTCAGTCATAACAATGCAGACAGGTTGCTCCACATCATCTGTTAAGGATATGACATCATATAGACAAGGATCTTTTGAGCATGCTTCTCTAGTAGCTGTCAACCTTGATTCACAGTCAGTTTCCCTGTCACATGCCAACACCAGTAAGGAATTCTTAATGTCGAATTCTAAGTTATATGAAGAATGCTGTTGGCTTTATGAGGATGAAAAGGGAATGAAGCATGGACCACATTCTATTTTGGAACTAATTTCCTGGCATCATTATGGACATCTCCGAGATTTGTCAGTGATTCATCATACTGAGAATAGGTGTAGCCCCTTTGTCCTTTTGTCTGCTATAAATGCATGGAAAACAGGAACGCTTGAAGACATCTGTAGATCAGATTCCAAAAGTGACAGGGCCTGTGGTGGTACCAGAAGCTTCATCTATGAAATATCTGAGGATATTTCTTCTCAGCTGCATCTGGGAGTCATGAAAACTGCCCGCAGGGTGGTGTTGGATGAGATTATCAGTAATACTATTGCAGAATTTGTTACTGAAAAGAAATCTTGGAGGCAAAAGCATGACTTTGTTGATCAACATTCTGAGACTAGCTCGTTAGGCTGCAGAACTACTGAGACTGCTGTGGAGATGAGAAAAGGTACTGTTCTTACAAATGAGCCAGCATCTTCCCAAATGTTTGACGATCAGTTGTCTTGTGACGTTCCAAGAGTGTCTTCAACAAGTACTAAATCGGTTGGAAGCATAGAAAACTTTTGGTGGTCATATGCAGTTGTTCGTAAAGTACTTTGTGATTATTGCATGCAAGTCATGTGGAATGCTGTGGTTTTTGACTCTATGGCAGAGTACATACATAACTGGAGAAAGAGAAAACTTTGGTCTATTTGTCCTAAGCCTCAGTTATCTATTAGTAGATGTAAAGATTATGGTGGAGTGATCACATCAGAAGAAGCTTTGCTTCCCAGGACAGGTTCCTCTGAACATGATGCTGTTCGGAATCCTCATTGTGGAGTGGTTGCAATGAAGGGAGACTATCTTAGTCAATCTGCTTATATGTCTTCTGTTGCCTTGAAAGATGGAAACATTTCAGAGAATGGAAGAGTCTCATGTTCTGATCGTGATCGTATAGGTCTGACATGTATTCTTGAAAGTGTGGAGAATGAGCTTCACTCGATGTCAGAAGCATCTTTGATTGAATACATCAAAAGTTTAGTTTACAAGGAAGTGAAAAGATTATTTAATTGTCCCAAAGAAGACACTTTAAACAAGGATGCTGTCTGTGATGACATTTTTCCAGAGACATCTTGCGACAAAACATCTGAGGGGATTTTATTTGACAATCAGGTTGCTATGAAAGGGGATCATCTTCAAGATTCTATATCTGGAAACCACATGTCTACTTTATTCTCAAGAGCGTTTCAGGAGTTGCATGCCAATGTAGGTGATGTGCTTGATGAAATCGAGAGTGGTGACATATCACCTCCTGGGTGTGAAAAAAATTCAAAAACTTTGGTCCCACAGTACAATTATAAATATCGACCTTCAAGATTTGTTGAAAGTGTTCCTAAGATAACTAAATATGTCACGGCAGCCCTGTGCCGACAGAAGTTGCATTCTGAGGCACTTGAAGAGTGGAAATCTTCTTTTCTTGATTCTGCCTTCAATCGACTTTCTGCATCATTCTGCACTATGAAGAAAGTCAGCCTGCCTGATGATTACATGGAAGGGAAAGTACAGAATTTGTCTGAGGAATTTTTTAATGATCCGACTCTGAGAAGAATGAAGAAAATGCCCAAGTTTTCTTCATCAGAAGATTCTCGGAAGGTTGGGAAATATACATATCATCGCAAGAATCTGCCACAGAAAAAGTTAGGTTCTTCTCAACACATAGCCGAACCTGTCATAAAAAAAGTGGATAAGCAGAAGAAATGTGTTTCGGGGGATATGGATAAGTCTTCCAAAGCTGGAGTATCTCCCGATAAAAATGCTAAGACTAAGCTGATCAAAGGGAAGAAGGAGGATAAGCAGGCTAGTGAAAAGTCTCTTGCTGTCAGTTCTAAAAGAAGCTTGCAGAATAAAAAGTCATCTATAAATAATGCAACTAGTAAAAAATTCTTCAAGCATTTACAGGCATTCCACGATGATGTCAAGGATGATGAGAAAAGTAATGGAGAAAAGATTTTAGCTGTTGTAGAAAATAGTATTGGCAAGAAAAAGTCAGCTGATAGCAATGGTCATGATGGTGCCATTCATGGAAAATCTGCTCGCCACTGCTCCAAGGAAACTCTTAACGCAACCAATAAAGTAGCAAAATCGAAAAGGAAGCATCTAGCGGATGATGTGCCATCTTCACGTCCTTCAAAGGCTCTGAAAGTTTCTTATCATGGTTCAAAGGTTGGACTTGGCAGACACAACATGTCAAAGAGGAAGTCTGCTAAATCCAAGCAAATGAATTTATGTCCTAGATCTGATGGATGTGCCAGGACTTCTATTGATGGGCAGACATGGCATAAATGGTCTGTAAATGCTAGTTCTGCTGATAGAGCACGTGTTAGGGGAACGCTGTGTGGTCCAAAGAACTGTATACCATCTGATAGTAATCAAACTCATTGGTCAAATTGTAAAGGTCTTTCTGCAAGGACGAATAGAGTGAAAATGCGTAACCTTCTTGCAGCTGCTGAAGGAGCTGATCTTCTGAAAGCCACTCAATTGAAGGCGAGGAAAAAATGCTTACGTTTTCAAAGAAGTAAAATACATGACTGGGGCATTGTTGCCATGGAGTCAATAGAGGCGGAGGATTTCGTGGTTGAATATATTGGGGAACTGATCCGTCCTCGGATATCCGATATACGTGAACGTCAGTATGAAAGGATGGGAATTGGCAGCAGTTACTTGTTTAGACTTGATGATGGTTATGTGGTTGATGCTACAAAAAGAGGTGGGATTGCAAGATTTATAAATCACTCCTGTGAGCCTAATTGCTATACCAAAGTCATATCTGTTGAGGGTCAGAAGAAGATCTTCATATATGCAAAACGCCACATAGCTGCTGGTGAAGAAATTACATACAATTATAAATTTCCTTTGGAGGAGAATAAGATTCCCTGCAACTGTGGCTCCAAAAAGTGTCGTGGATCACTGAATTAG 3540 0.4011 MKDTGDISSCSCLDDRVDSDSGVDMSCQSNIKSVDVPVCFTTGNTFQDQSHPGYVQPAFVSGWMYVNENGQMCGPYIQEQLYEGLTTGFLPVELPVYPVMNGTLMNPVPLNYFKQFPDHVSTGFVYLTMSSSVITMQTGCSTSSVKDMTSYRQGSFEHASLVAVNLDSQSVSLSHANTSKEFLMSNSKLYEECCWLYEDEKGMKHGPHSILELISWHHYGHLRDLSVIHHTENRCSPFVLLSAINAWKTGTLEDICRSDSKSDRACGGTRSFIYEISEDISSQLHLGVMKTARRVVLDEIISNTIAEFVTEKKSWRQKHDFVDQHSETSSLGCRTTETAVEMRKGTVLTNEPASSQMFDDQLSCDVPRVSSTSTKSVGSIENFWWSYAVVRKVLCDYCMQVMWNAVVFDSMAEYIHNWRKRKLWSICPKPQLSISRCKDYGGVITSEEALLPRTGSSEHDAVRNPHCGVVAMKGDYLSQSAYMSSVALKDGNISENGRVSCSDRDRIGLTCILESVENELHSMSEASLIEYIKSLVYKEVKRLFNCPKEDTLNKDAVCDDIFPETSCDKTSEGILFDNQVAMKGDHLQDSISGNHMSTLFSRAFQELHANVGDVLDEIESGDISPPGCEKNSKTLVPQYNYKYRPSRFVESVPKITKYVTAALCRQKLHSEALEEWKSSFLDSAFNRLSASFCTMKKVSLPDDYMEGKVQNLSEEFFNDPTLRRMKKMPKFSSSEDSRKVGKYTYHRKNLPQKKLGSSQHIAEPVIKKVDKQKKCVSGDMDKSSKAGVSPDKNAKTKLIKGKKEDKQASEKSLAVSSKRSLQNKKSSINNATSKKFFKHLQAFHDDVKDDEKSNGEKILAVVENSIGKKKSADSNGHDGAIHGKSARHCSKETLNATNKVAKSKRKHLADDVPSSRPSKALKVSYHGSKVGLGRHNMSKRKSAKSKQMNLCPRSDGCARTSIDGQTWHKWSVNASSADRARVRGTLCGPKNCIPSDSNQTHWSNCKGLSARTNRVKMRNLLAAAEGADLLKATQLKARKKCLRFQRSKIHDWGIVAMESIEAEDFVVEYIGELIRPRISDIRERQYERMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEENKIPCNCGSKKCRGSLN 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0087 1179 MobiDBLite consensus disorder prediction 870 887 - -
Mibi06g0087 1179 CDD SET_SETD1 1028 1175 - -
Mibi06g0087 1179 Gene3D SET domain 934 1178 IPR046341 -
Mibi06g0087 1179 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 4 1179 IPR044570 GO:0042800|GO:0051568
Mibi06g0087 1179 MobiDBLite consensus disorder prediction 727 743 - -
Mibi06g0087 1179 SMART PostSET_3 1163 1179 IPR003616 -
Mibi06g0087 1179 MobiDBLite consensus disorder prediction 764 788 - -
Mibi06g0087 1179 MobiDBLite consensus disorder prediction 930 952 - -
Mibi06g0087 1179 MobiDBLite consensus disorder prediction 868 887 - -
Mibi06g0087 1179 SUPERFAMILY GYF domain 189 244 IPR035445 -
Mibi06g0087 1179 MobiDBLite consensus disorder prediction 813 827 - -
Mibi06g0087 1179 Pfam SET domain 1052 1156 IPR001214 GO:0005515
Mibi06g0087 1179 ProSiteProfiles GYF domain profile. 192 242 IPR003169 GO:0005515
Mibi06g0087 1179 ProSiteProfiles SET domain profile. 1040 1157 IPR001214 GO:0005515
Mibi06g0087 1179 Gene3D - 53 137 IPR035445 -
Mibi06g0087 1179 Gene3D - 178 265 IPR035445 -
Mibi06g0087 1179 MobiDBLite consensus disorder prediction 795 812 - -
Mibi06g0087 1179 ProSiteProfiles Post-SET domain profile. 1163 1179 IPR003616 -
Mibi06g0087 1179 SUPERFAMILY SET domain 1035 1176 IPR046341 -
Mibi06g0087 1179 SMART set_7 1040 1163 IPR001214 GO:0005515
Mibi06g0087 1179 MobiDBLite consensus disorder prediction 727 827 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0087 Mibi-ChrMibi06 1700294 1708618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0087 1042 1179 C2H2 Transcription Factor Family AT2G23740 38.125 2.50e-19 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi06g0087 SET 3.5e-21 No_clan