Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0084 ATGTCTCCTAATGTCAGAGACCTTCAGTTATCTTCTCTCTCCGGTGGCCGTCAAATCTCCTCCTCCGGTGACCTCGAAGATGTACGGCTCTTAGACTCCTACGACCAAACCGACTCTTCATTTGGATCTGAAGATGACGGAATCAGACGGATTCAGGTCAGAGTCTCTGGCATGACCTGTGCTGCTTGCTCCAATTCCGTCCAATCAGCTCTCAATTCCGTTAACGGCGTTATCTCTGCCTCCGTCGCTCTACTTCAGAATAAGGCCGACGTCGTTTTCAACTCTACTCTCATCAAGGATGAAGACATTAAAAATGCAATTGAAGATGCAGGATTTGAAGCAGACATATTACCTGATACCAGTACAGTTGGACCGAAGCTGCAACAAACCCTGGTTGGACGGTTCACAATTGGCGGTATGACGTGTGCAGCCTGTGTGAATTCTGTTGAAGGTATTTTGAGGGATCTTACTGGGGTCAAAAGAGCTGTTGTAGCTTTGGCAACTTCTCTGGGGGAAGTTGAATACGATCCTACTGTAATTAGTAAAGATGATATAATCAATTCAATTGAAGATGCTGGTTTTGAAGCTTCTTTTGTACAGAGTAACGAGCAAGATAAAATAATTCTGGGGATTGTTGGTTTGTACAGCCTGATTGATGCACAAGTTTTAGAAGGCATGCTCAGCAGTATGAAAGGAGTCAAAGAGTTCCATTTTGACCAGATATCATGCGAACTGGAAGTTGTTTTTGACCCTGAAGTTCTCAATTCTAGATCCCTAGTTGACGGGATTGAAGGAGGAAGCAATGGGAAGTTTAAATTACATGTTAGGAGCCCGTATGCAAGAATGGTCTCTAAGGATGTTGAAGAGATCACCTCTATGTTTCGGCTTTTTACCTCAAGCCTGCTTCTAAGTATTCCCCTCTTTCTCGTTGGTGTAGTTTGTCCTCATATACCAATGATATACTCCTTACTACTTTGGAGATGTGGGCCTTTCCTCTTGGACGATTGGCTGAAGTGGACATTAGCTAGTATTATCCAATTTGGGATTGGAAAGCGCTTCTACATTGCAGCTGGCAGAGCTCTCAAGAATGGTTCAACTAACATGGATGTGCTGGTTGCTTTGGGAACTACAGCTTCTTATGTCTATTCTGTTTGTGCTCTTCTTTATGGTGCCTTTACTGGATTTTGGTCTCCGACATATTTTGAAACAAGTGCCATGCTTATAACATTTGTATTGTTGGGGAAGTATTTGGAATGCCTTGCGAAGGGGAAGACATCAGATGCCATCAAGAAGTTAGTAGAACTGGCCCCTGCAACAGCTCTGTTGGTGGTCAAAGACAAAGGTGGTAAATCTGTTGAAGAGAGGGAAATAGATTCTTTGCTCATTCAGCCTGGTGACATATTAAAGGTTCTTCCCGGTACTAAGGTCCCTGCTGATGGCACCGTTACATGGGGCTCAAGTTATGTGAACGAGAGTATGGTAACTGGTGAAGCTGTGCCTGTTTCAAAGGAAGTTGATGCATCTGTTATCGGAGGTACTATAAATTTACATGGTGTCCTTCACATTCGAGCCACCAAAGTAGGAGCTGATACAGTTTTGAGTCAGATAATTAGATTGGTAGAGACAGCCCAGATGTCCAAAGCCCCTATTCAAAAATTTGCTGATTATGTAGCAAGCATTTTTGTCCCTACAGTTGTTTCTTTGGCATTATTGACATTATTAGGCTGGTATGTTGCTGGAGCTCTAGGAGCTTACCCTGATGAATGGCTGCCGAAAAACGGAAATCACTTTGTCTTAGCCCTTATGTTTGCAATATCTGTGGTGGTGATTGCATGTCCCTGTGCGCTTGGCTTGGCAACACCAACTGCTGTCATGGTAGCAACAGGGGTTGGAGCTAAGAATGGGGTTTTAATTAAAGGAGGAGATGCCTTGGAAAAGGCACAGATGGTGAAGCACCTAATATTTGACAAAACAGGCACTCTAACTCAGGGAAAAGCCACCGTTACAACTGCCAAGGTATTCACAGGAATGGAACGGGGAGAGTTTCTTATATTGGTGGCTTCTGCAGAGGCTAGCAGTGAACATCCACTGGGGAAAGCAATAGTGGAGTATGCACGCCATTTTCATTTCTTTGATGAGTCATCTGCAGCCACTGGTACCAAAGATGCAGCCAAGGAGATAAAAGTTGGATGGCTTTATGATGTCTCAGATTTCTCTGCTCTTCCAGGAAGGGGTGTCCAGTGCCTTTTACATGGGAAGCGTATTCTGGTGGGTAACAGGAAGCTAATGGTGGAAAGTGGCATAGATATCCCCACCCAAGTAGAAAATTTTGTGGTGGAGCTGGAAGAAAGTGCAAAGACAGGGGTCCTTGTTGCATATGGCGATGAATTAATTGGCGTTCTAGGGGTTGCAGACCCACTAAAAAGGGAAGCTTCTGTGGTTATAGAAGGCCTCCAGAAAATGGGTGTCAGGCCGATTATGGTCACAGGAGATAACTTGAGAACTGCTCGGGCTGTTGCCAAGGAGGTTGGAATCGAAGATGTGAGAGCAGAGGTGATGCCAGCAGGAAAGGCTGAGGTTGTTCGGTCATTCCAAAAAGATGGAAGCATAGTAGCAATGGTGGGTGATGGAATTAACGACTCTCCGGCATTAGCCGCTGCAGATGTCGGCATGGCGATTGGGGCTGGCACAGACATTGCCATAGAAGCTGCAGACTATGTACTAATGAGAAACAATCTAGAAGATGTAATCACAGCCATTGATCTCTCGAGAAAAACTTTTTCTCGGATTCGATTGAACTATGTATTTGCAATGGCTTATAATATTGTTGCTATACCAGTTGCTGCTGGTGTTCTGTACCCTTCCTTAGGGATCAAGCTGCCTCCTTGGGTTGCTGGTGCATGCATGGCTCTCTCATCCGTAAGTGTTGTTTGCTCTTCTTTGCTTCTTAGGAGATATAGAAGACCCAGACTTACTACAATACTTGAAATAGTTGTAGAATAA 3003 0.4442 MSPNVRDLQLSSLSGGRQISSSGDLEDVRLLDSYDQTDSSFGSEDDGIRRIQVRVSGMTCAACSNSVQSALNSVNGVISASVALLQNKADVVFNSTLIKDEDIKNAIEDAGFEADILPDTSTVGPKLQQTLVGRFTIGGMTCAACVNSVEGILRDLTGVKRAVVALATSLGEVEYDPTVISKDDIINSIEDAGFEASFVQSNEQDKIILGIVGLYSLIDAQVLEGMLSSMKGVKEFHFDQISCELEVVFDPEVLNSRSLVDGIEGGSNGKFKLHVRSPYARMVSKDVEEITSMFRLFTSSLLLSIPLFLVGVVCPHIPMIYSLLLWRCGPFLLDDWLKWTLASIIQFGIGKRFYIAAGRALKNGSTNMDVLVALGTTASYVYSVCALLYGAFTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLVVKDKGGKSVEEREIDSLLIQPGDILKVLPGTKVPADGTVTWGSSYVNESMVTGEAVPVSKEVDASVIGGTINLHGVLHIRATKVGADTVLSQIIRLVETAQMSKAPIQKFADYVASIFVPTVVSLALLTLLGWYVAGALGAYPDEWLPKNGNHFVLALMFAISVVVIACPCALGLATPTAVMVATGVGAKNGVLIKGGDALEKAQMVKHLIFDKTGTLTQGKATVTTAKVFTGMERGEFLILVASAEASSEHPLGKAIVEYARHFHFFDESSAATGTKDAAKEIKVGWLYDVSDFSALPGRGVQCLLHGKRILVGNRKLMVESGIDIPTQVENFVVELEESAKTGVLVAYGDELIGVLGVADPLKREASVVIEGLQKMGVRPIMVTGDNLRTARAVAKEVGIEDVRAEVMPAGKAEVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAADYVLMRNNLEDVITAIDLSRKTFSRIRLNYVFAMAYNIVAIPVAAGVLYPSLGIKLPPWVAGACMALSSVSVVCSSLLLRRYRRPRLTTILEIVVE 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0084 1000 CDD HMA 52 114 IPR006121 GO:0046872
Mibi06g0084 1000 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 368 983 IPR027256 GO:0006812|GO:0016020|GO:0019829
Mibi06g0084 1000 FunFam Copper-transporting ATPase 1, putative 422 544 - -
Mibi06g0084 1000 SUPERFAMILY Calcium ATPase, transmembrane domain M 391 950 IPR023298 -
Mibi06g0084 1000 ProSiteProfiles Heavy-metal-associated domain profile. 132 198 IPR006121 GO:0046872
Mibi06g0084 1000 FunFam Copper-transporting ATPase RAN1 661 753 - -
Mibi06g0084 1000 ProSitePatterns Heavy-metal-associated domain. 137 166 IPR017969 GO:0046872
Mibi06g0084 1000 ProSitePatterns Heavy-metal-associated domain. 55 85 IPR017969 GO:0046872
Mibi06g0084 1000 CDD HMA 135 197 IPR006121 GO:0046872
Mibi06g0084 1000 MobiDBLite consensus disorder prediction 1 20 - -
Mibi06g0084 1000 Gene3D - 48 119 - -
Mibi06g0084 1000 PRINTS Copper-transporting ATPase 1 signature 50 75 - -
Mibi06g0084 1000 PRINTS Copper-transporting ATPase 1 signature 105 125 - -
Mibi06g0084 1000 PRINTS Copper-transporting ATPase 1 signature 76 99 - -
Mibi06g0084 1000 Pfam Heavy-metal-associated domain 53 113 IPR006121 GO:0046872
Mibi06g0084 1000 Pfam Heavy-metal-associated domain 135 195 IPR006121 GO:0046872
Mibi06g0084 1000 SUPERFAMILY HMA, heavy metal-associated domain 131 203 IPR036163 GO:0046872
Mibi06g0084 1000 SUPERFAMILY HMA, heavy metal-associated domain 46 118 IPR036163 GO:0046872
Mibi06g0084 1000 SUPERFAMILY HAD-like 653 980 IPR036412 -
Mibi06g0084 1000 FunFam Copper-exporting P-type ATPase 754 805 - -
Mibi06g0084 1000 Gene3D - 132 198 - -
Mibi06g0084 1000 CDD P-type_ATPase_Cu-like 295 970 - -
Mibi06g0084 1000 SFLD p-type atpase 636 926 IPR044492 -
Mibi06g0084 1000 Pfam haloacid dehalogenase-like hydrolase 650 888 - -
Mibi06g0084 1000 SUPERFAMILY Calcium ATPase, transduction domain A 454 540 IPR008250 -
Mibi06g0084 1000 PRINTS P-type cation-transporting ATPase superfamily signature 874 893 - -
Mibi06g0084 1000 PRINTS P-type cation-transporting ATPase superfamily signature 654 668 - -
Mibi06g0084 1000 PRINTS P-type cation-transporting ATPase superfamily signature 821 831 - -
Mibi06g0084 1000 PRINTS P-type cation-transporting ATPase superfamily signature 799 810 - -
Mibi06g0084 1000 PRINTS P-type cation-transporting ATPase superfamily signature 490 504 - -
Mibi06g0084 1000 PRINTS P-type cation-transporting ATPase superfamily signature 897 909 - -
Mibi06g0084 1000 Pfam E1-E2 ATPase 437 634 - -
Mibi06g0084 1000 TIGRFAM TIGR00003: copper ion binding protein 51 114 IPR006122 GO:0005507
Mibi06g0084 1000 TIGRFAM TIGR00003: copper ion binding protein 135 196 IPR006122 GO:0005507
Mibi06g0084 1000 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 754 955 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi06g0084 1000 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 407 675 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi06g0084 1000 Gene3D - 422 544 - -
Mibi06g0084 1000 SFLD Haloacid Dehalogenase 636 926 - -
Mibi06g0084 1000 FunFam Copper-exporting P-type ATPase A 48 117 - -
Mibi06g0084 1000 ProSitePatterns E1-E2 ATPases phosphorylation site. 656 662 IPR018303 -
Mibi06g0084 1000 ProSiteProfiles Heavy-metal-associated domain profile. 50 116 IPR006121 GO:0046872
Mibi06g0084 1000 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 42 995 - -
Mibi06g0084 1000 FunFam Probable copper-transporting ATPase HMA5 777 931 - -
Mibi06g0084 1000 FunFam Copper-exporting P-type ATPase A 129 199 - -
Mibi06g0084 1000 Gene3D - 753 805 IPR023299 GO:0000166
Mibi06g0084 1000 Gene3D - 661 752 IPR023299 GO:0000166
Mibi06g0084 1000 Gene3D - 621 931 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0084 Mibi-ChrMibi06 1590103 1596278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0084 1 1000 Primary Pumps ATPases AT5G44790 74.257 0.0 1504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g0084 06 1590103 1596278 Mibi06g0084 06 1590103 1596278 ECH