Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0082 ATGAATAACCTTACGAAATTGGTAACCTTGCGTATTGGAGAAAATAATTTCAAAGATTCTAAGAATTGGACCTCATTTGCTGGAACCTTTGGCTATGCTGCTCCAGAACTTGCTTATACAATGGAAGTGACAGAGAAATGCGACGTTTATAGCTTTGGAGTGCTAGCTTTGGAAATGATCATGGGAAAGCATCCAAGGGATCTCATAATGTCTTCTACTGATGCACCAACAATAGTCGCTTATGATTTGGATTTGAAGGAAGTGTTAGACAAAAGGCTACCTTATCCTCAAGATTCAGTGGCTAAGAAGGTGATGCTGATTGCAAGAATAGCTTTTGCATGCTTGAATGAAAATCCACGTACTCGCCCAACTATGGAGCAAGTATGCAAGGAGCTTGCTATTTCATGA 408 0.3995 MNNLTKLVTLRIGENNFKDSKNWTSFAGTFGYAAPELAYTMEVTEKCDVYSFGVLALEMIMGKHPRDLIMSSTDAPTIVAYDLDLKEVLDKRLPYPQDSVAKKVMLIARIAFACLNENPRTRPTMEQVCKELAIS 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0082 135 Gene3D Transferase(Phosphotransferase) domain 1 5 135 - -
Mibi06g0082 135 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0082 135 PANTHER LEUCINE RICH REPEAT KINASE 2 18 132 - -
Mibi06g0082 135 SUPERFAMILY Protein kinase-like (PK-like) 20 130 IPR011009 -
Mibi06g0082 135 Pfam Protein kinase domain 17 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0082 Mibi-ChrMibi06 1499242 1501397 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0082 18 132 Receptor kinase-like Gene Family AT5G49660 41.667 2.55e-19 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi06g0082 Pkinase 9.3e-13 CL0016