Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0081 ATGGCGTATGCTCTAACCATTGGTTTGGGATCTGTGTTGTTAGCAATAGTTTCGATGGGAGTTTCATATATTGTTTGTTACCACAATCCAAGGCAAGCTAAAAGTCTAGAAATAGAAGCACAAACTCAAAATTTGTTTGCTATATGGAGTTATGATGGGAAACTAGTATATGAAAACATTATTGAAGCCACAGAGGAGTTTGATGAAAAATATCTCATTGGGGTGGGAGGATTTGGAAGCGTTTACAAAGCTGAATTATCCACAGGTCAAGTTGTGGCTGTGAAGAAGCTTCATTCACTACCAGAAAATGATCAATGCTATCAAGAAGCTTTTATGAGTGAGATTCGGGCCTTGACAGAAACCAGACATCACAATATCATCAAGCTCTATGGGTTTTGTAGGCATTCAAAGTTCTCCTTTTTGATTTATGAATTCTTGGATGGGGCCAGCTTAGATAAGATACTGGGTGATGAGATGCAAGCAGTTGCATTGGATTGGAGTAAGAGAATCAAAGTTGTTGAAGGCATGGCTAATGCTTCATACTATCTTCATCATGGATGCTCACCTCCCATAGTTCATCGTGACATATCAACCAAAAATGTCATTTTAGACTCAAATTATGAGGCTCACCTCTCTGACTTTGGGACGGCCAAGCTTCTGTATCCAGATTCCAACAATTGGACTTCATTTGCCGGAACGTTTGGCTATGCTGCTCCAGAACTTGCTTATACAATGGAAGTGACAGAGAAATGCGACGTTTATAGCTTTGGAGTGCTAGCTTTGGAAATAATTATGGGAAAGCATCCAAGGGATCTCATAATGTCTTCTACTGGAGCACCAACATTAATTGCTTATGATTTGGATTTGAAGGAAGTGTTAGACCAAAGGCTACCTTATCCTCAAGACTTAGTGGCTAAGAAGGTGATATCGCTTGTGAGAATAGCTTTTACATGCTTGAATGAAAATCCACGTACTCGCCCAACCATGGAGCAAGTATGCAAGGAGCTTGCAATGGCAAAATCACATGTTTTTGGCTCCATTTCATGA 1047 0.4002 MAYALTIGLGSVLLAIVSMGVSYIVCYHNPRQAKSLEIEAQTQNLFAIWSYDGKLVYENIIEATEEFDEKYLIGVGGFGSVYKAELSTGQVVAVKKLHSLPENDQCYQEAFMSEIRALTETRHHNIIKLYGFCRHSKFSFLIYEFLDGASLDKILGDEMQAVALDWSKRIKVVEGMANASYYLHHGCSPPIVHRDISTKNVILDSNYEAHLSDFGTAKLLYPDSNNWTSFAGTFGYAAPELAYTMEVTEKCDVYSFGVLALEIIMGKHPRDLIMSSTGAPTLIAYDLDLKEVLDQRLPYPQDLVAKKVISLVRIAFTCLNENPRTRPTMEQVCKELAMAKSHVFGSIS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0081 348 SUPERFAMILY Protein kinase-like (PK-like) 50 336 IPR011009 -
Mibi06g0081 348 PANTHER LEUCINE RICH REPEAT KINASE 2 12 341 - -
Mibi06g0081 348 Gene3D Transferase(Phosphotransferase) domain 1 147 344 - -
Mibi06g0081 348 ProSitePatterns Tyrosine protein kinases specific active-site signature. 191 203 IPR008266 GO:0004672|GO:0006468
Mibi06g0081 348 Gene3D Phosphorylase Kinase; domain 1 28 145 - -
Mibi06g0081 348 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Mibi06g0081 348 FunFam Leucine-rich repeat receptor protein kinase MSP1 30 145 - -
Mibi06g0081 348 FunFam MDIS1-interacting receptor like kinase 2 146 342 - -
Mibi06g0081 348 Pfam Protein kinase domain 69 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0081 348 ProSiteProfiles Protein kinase domain profile. 67 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0081 Mibi-ChrMibi06 1472099 1473291 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0081 1 239 Receptor kinase-like Gene Family AT4G08850 46.531 7.38e-70 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi06g0081 Pkinase 1e-44 CL0016