Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0079 ATGAGGCTCACCTCTCAGACTTTGGGACGGCCAAGCTTTTAACTTGCATATACAATGGAAGTGACAGAGAAATGCGATGTTTATAGCTTTGGAGTGCTAGCTTTGGAAATAATTTTGGGAAAGCATCCCAGGGATCTCATAATGTCTTCTACTGATGCACCAACAACAATTGCTTATGATTTGGATTTGAAAGAAGTGTTAGACCAAAGATTACCTTATCCTCAAGATTCAGTGGCTGAGAAGGTGATGCTGATTGCGAGAATAGCTTTTCCATGCTTGAATGAAAAACCACGTGCTCGCCCAACTGTGGAGCAAGTATGCAAGGAGCTTGCGATTCCGTGA 342 0.4269 MRLTSQTLGRPSFXLAYTMEVTEKCDVYSFGVLALEIILGKHPRDLIMSSTDAPTTIAYDLDLKEVLDQRLPYPQDSVAEKVMLIARIAFPCLNEKPRARPTVEQVCKELAIP 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0079 113 Gene3D Transferase(Phosphotransferase) domain 1 4 112 - -
Mibi06g0079 113 Pfam Protein tyrosine and serine/threonine kinase 19 110 IPR001245 GO:0004672|GO:0006468
Mibi06g0079 113 SUPERFAMILY Protein kinase-like (PK-like) 18 110 IPR011009 -
Mibi06g0079 113 PANTHER LEUCINE RICH REPEAT KINASE 2 13 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0079 Mibi-ChrMibi06 1367070 1367619 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0079 16 113 Receptor kinase-like Gene Family AT1G75820 35.345 7.16e-12 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi06g0079 PK_Tyr_Ser-Thr 4.4e-07 CL0016