Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0070 ATGCTCTCATTTCCAATGGTTTCTTCTTTGCCTCTTTCTCATCCCACTACTCATAGCTTCTTCTCAAAAACCCAGTTGAGAGGATTTTGCCATGGCTTCTGGCGACCCAGCTTCTCATTTTGCCGCGACTCCGAAAGCAAAGTTCGACCCATCAAAGCTTCGGTTGATACAGCTCCATTCCCATTGTTCCAACCTCCTAAAGTTGACGAGTCGTCTTCTGAGTTGGAGCCAGCAGACCCAGATTTCTACAAGATAGGTTATATTCGAAGCATGCGAGCTTATGGAGTTGAGTTTAAGGAAGGGCCTGATGGGTTTGGTGTGTACGCTTCTAAAGATGTAGAACCTCTTCGCCGAGCCAGGGTTATAATGGAAATTCCTCTTGAATTGATGTTAACCGTGAGTCACAAGCTCCCATGGATGTTCTTCCCTGATATAATTCCAGTGGGACATCCAATATTTGATATTATCAACTCAACAAATCCAGAGACAGATTGGCACCTAAGATTAGCATGCCTGCTGTTATATGCATTGGATTGTCAGGACAACTTTTGGCAGTTGTATGGTGACTTCTTACCCAGTGCTGATGAATGCACTAGCTTAATTCTGGCAACAGAGGAGGAACTTTTGGAGCTGCAGGATCCAAACCTTGCTTCTACCATCAGGAACCAGCAACGTCATGCCTTGGATTTTTGGGAGAAGAATTGGCACAATGCTGTTCCCCTTAAGATAAAGCGTCTTGCTCGTGATCCTCAAAGGTTCATGTGGGCAGTAGGTATAGCACAATCACGATGCATTAACATGCAAATGAGGCTTGGTGCACTGCATCAAGATGCAAATATGTTGATTCCTTACGCTGACATGCTGAACCATTCATTTGAGCCAAATTGCTTTTTCCATTGGCGCTTCAAGGACCGGATGGTTGAGGTGCTTATAAATGCTGGACAGCGGATTAAAAAGGGAGATGAGATGACGGTTGATTACATGAGTAGACAAAAGAACGACATGTTTATGCAAAGATATGGCTTCTCATCATCTGTGAATCCTTGGGATGAGATCAAATTCTCTGGAGATGCACGTATACATTTGGATTCCTTCTTGTCAGTATTCAACATATCTGGCCTTCCTGAAGAGTATTATCATAACACTCTTCTATCTAAAGAGAGCGATACATTTGTAGATGGAGCAGTCATAGCTGCGGCACGAACGCTTCCAACTTGGTCAGATGGGGATGTACCTCCAATCCCTAGTGTGGAACAGAAGGCCGCGAAGGAGTTACAAAATGAATGCCGACAAATGCTTACAAAATTTCCCACAAACTCCAAGCAAGACCAAAAATTGCTAGATTCATTGCAAGATGCTTCCAGGACTCTTGAAGCTGCAATAAAGTACAGATTGCACAGGAAGTTGTTCATAGAGAAAGTCATCCAAGCATTAGACATCTATCAAGAGAGATTACTCTTCTGA 1464 0.4344 MLSFPMVSSLPLSHPTTHSFFSKTQLRGFCHGFWRPSFSFCRDSESKVRPIKASVDTAPFPLFQPPKVDESSSELEPADPDFYKIGYIRSMRAYGVEFKEGPDGFGVYASKDVEPLRRARVIMEIPLELMLTVSHKLPWMFFPDIIPVGHPIFDIINSTNPETDWHLRLACLLLYALDCQDNFWQLYGDFLPSADECTSLILATEEELLELQDPNLASTIRNQQRHALDFWEKNWHNAVPLKIKRLARDPQRFMWAVGIAQSRCINMQMRLGALHQDANMLIPYADMLNHSFEPNCFFHWRFKDRMVEVLINAGQRIKKGDEMTVDYMSRQKNDMFMQRYGFSSSVNPWDEIKFSGDARIHLDSFLSVFNISGLPEEYYHNTLLSKESDTFVDGAVIAAARTLPTWSDGDVPPIPSVEQKAAKELQNECRQMLTKFPTNSKQDQKLLDSLQDASRTLEAAIKYRLHRKLFIEKVIQALDIYQERLLF 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0070 487 CDD SET_LSMT 95 342 - -
Mibi06g0070 487 ProSiteProfiles SET domain profile. 83 328 IPR001214 GO:0005515
Mibi06g0070 487 SUPERFAMILY SET domain 103 342 IPR046341 -
Mibi06g0070 487 Pfam SET domain 104 327 IPR001214 GO:0005515
Mibi06g0070 487 Gene3D set domain protein methyltransferase, domain 1 88 342 - -
Mibi06g0070 487 Pfam Rubisco LSMT substrate-binding 416 468 IPR015353 -
Mibi06g0070 487 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 72 455 - -
Mibi06g0070 487 FunFam Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 88 342 - -
Mibi06g0070 487 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 339 484 IPR036464 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi06g0070 SET 4.2e-20 No_clan