Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0069 ATGGATCTTTCATTGAGTTTTGCAAGTGGTTCGAGTGAAGAGCAAAATAGTGCAAGCTCTCATAAGACCAGAAGGAGGTCTGCTCATCGTCACACTTTTATGCAAATCCAAAGACTAGAAGAAGTTTACAAGAACTGTCCACATCCTGATGAGGAACAACGCCAAGATTTAAGCAAAGAGCTAGGACTCGAACCCAACCAAATAAAGTTCTGGTTTCAGAACAAGAGAACTCAAACCAAGGCAATTAATGAGAGGATAGATAACAATGCCCTTCGAGCTGAGAATGAGAGAATCCAATCGGAGAATTCGGCAATCAGAGAGGTTCTCAAGAATGTAGCATGCCCTGCTTGTGGTGGTCCTTCCTATGGTGATGAAGAACGCAAACTTACCATGAAAAAACTTATCCAAGAGAACGCCTATCTCAAACAAGAGTTTGAAAAGGCGACAAGGCTTGTTGCAGACTATGCTGGGAATCCCATGCTGATACAAAAAAATTTCCTAACCCTAGGAACTCCATCAACGTCATCCTCCAAGTCCATATTGCCTGGGGGTGGAAACAAAAACAATAGTAACAACATGTTGCCAAAACAAGGAAACAACAAGGCATTGATGTGGGAGACAGCCATTTGTGCCCGTGAAGAACTTATGAGGCTTTTGCGTGTCGAAGAGCCGCTTTGGATAACCTCTCAGGCATCTGCCGTCGATGACGTCGCCAACTACGGCTTCTTCTACCTACCAAACCCTGAAACCTATGAGAGGATGTTCCCTAGGGATCATCAACTTCGCAAGAAGCTCATTGACGCTCGTGTTGAATGTTCTAAAGCTTCTACTATTGTCAATATGCCTCCCTTGCTCCTGGTTGACATGTTTCTAGACTGTGAAAAATGGGTTAGTCTGTTCCCAACAATTGTTGGAAGAGCAAGCACAGTGAAAGTGCTTGAAGCTGGTGCGCATGGGAGCAGGAGTGAAGCTTTGCAGCTGGTATGTGTTTTAAGTTTATTATTATATATATATGAAGAAGTTCACATGGTAACGCCAATGGTGGCACCTCGTGAATATGTGTTCCTTCGATACTGTCACCAACCGGAGATTGGGACATGGGTGATATGTGATGTGTCGTTTGTTCCACTTGAAGAAACTGGTATTCCAGCTTTTTCTTCCCCTTTCTGGAAGCTTCCTTCTGGTTGCATGATTCAACAACTACCCAATGGCTTCTCCAAGGTGACATGGGTGGAACATGTGGAAGTGGAGCATGAGAAGCTAATAGTGCACATGCTGTACAGAAATCTGGTGTTTAGCAGCATATCTTATGGCGCCCAAAGATGGGTGGCAGGACTTGAGAGAATGTGTGAGAGAGTTGGTCACACCATGAGCACTCAGTTTCCTCTAGAGGAAGCAACCTCACTGGTTATGAATGTACCAGATGGGAGGAGAAGTTTAATGAAGTTAGGGCATAGGATGGTGAATGACTTCTGCGAAGTGATAAGCACGAACAAGAGTAAGAATAGGAATGACGGATTTGAAGAGATAAGTGAAGGGAATATTAATAATGGTATGAGAATGTTCATTCGCAATAACTTGGAGAGAGGTGAAGCTGTTGGTACCATTCTCACTGCTGCTTCTTCTATGTGGCTACCTCTCCCTCCAAACCAAATCTTCCACTACCTTTGTGACGTCTCTCGCCGATTTCAGTGGGACCTTCTATGCCATGAGAGTTCTGACCAAGAGGTTGTTCGCATCTCAACTGGAGCTCATCCTGCACACTACATATCAGTTATCCAGACATACAGTGAGAGTAAGAACATAGCGATAATTCAAGAAACATGTGTGGAGCCAATGGGATGCTTGGTGGTGTATGCTCCTGTGGATAAGGTGGCCATGAAAGCCGCCATGCAAGGCCATGATTCGGCCGCCATCTCGATTCTGCCGTCCGGCTTCGTCGTCACAAGGGACAACATGGGACGATCCGGCGGCGGCGGGTCCATAGTGACGTTAACTGTGCAGATTTTGACAAGTGACAATGGTGTGGAGATGAGGAATATGAGCTTGCAGAATTCTGCCACTGCGAGTCATCTTGTGACCACTACACTTGACAAGATCAAGTTTGCTCTCATGAATTAG 2121 0.4517 MDLSLSFASGSSEEQNSASSHKTRRRSAHRHTFMQIQRLEEVYKNCPHPDEEQRQDLSKELGLEPNQIKFWFQNKRTQTKAINERIDNNALRAENERIQSENSAIREVLKNVACPACGGPSYGDEERKLTMKKLIQENAYLKQEFEKATRLVADYAGNPMLIQKNFLTLGTPSTSSSKSILPGGGNKNNSNNMLPKQGNNKALMWETAICAREELMRLLRVEEPLWITSQASAVDDVANYGFFYLPNPETYERMFPRDHQLRKKLIDARVECSKASTIVNMPPLLLVDMFLDCEKWVSLFPTIVGRASTVKVLEAGAHGSRSEALQLVCVLSLLLYIYEEVHMVTPMVAPREYVFLRYCHQPEIGTWVICDVSFVPLEETGIPAFSSPFWKLPSGCMIQQLPNGFSKVTWVEHVEVEHEKLIVHMLYRNLVFSSISYGAQRWVAGLERMCERVGHTMSTQFPLEEATSLVMNVPDGRRSLMKLGHRMVNDFCEVISTNKSKNRNDGFEEISEGNINNGMRMFIRNNLERGEAVGTILTAASSMWLPLPPNQIFHYLCDVSRRFQWDLLCHESSDQEVVRISTGAHPAHYISVIQTYSESKNIAIIQETCVEPMGCLVVYAPVDKVAMKAAMQGHDSAAISILPSGFVVTRDNMGRSGGGGSIVTLTVQILTSDNGVEMRNMSLQNSATASHLVTTTLDKIKFALMN 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0069 706 CDD START_ArGLABRA2_like 201 451 - -
Mibi06g0069 706 Coils Coil 131 151 - -
Mibi06g0069 706 Gene3D - 259 451 IPR023393 -
Mibi06g0069 706 CDD homeodomain 25 80 IPR001356 GO:0003677
Mibi06g0069 706 Pfam Homeodomain 26 80 IPR001356 GO:0003677
Mibi06g0069 706 ProSitePatterns 'Homeobox' domain signature. 57 80 IPR017970 GO:0000981|GO:0006355
Mibi06g0069 706 SUPERFAMILY Bet v1-like 473 672 - -
Mibi06g0069 706 SUPERFAMILY Homeodomain-like 6 82 IPR009057 -
Mibi06g0069 706 SUPERFAMILY Bet v1-like 272 453 - -
Mibi06g0069 706 SMART START_1 224 452 IPR002913 GO:0008289
Mibi06g0069 706 MobiDBLite consensus disorder prediction 1 29 - -
Mibi06g0069 706 Pfam START domain 208 452 IPR002913 GO:0008289
Mibi06g0069 706 Coils Coil 88 108 - -
Mibi06g0069 706 MobiDBLite consensus disorder prediction 1 17 - -
Mibi06g0069 706 SMART HOX_1 24 86 IPR001356 GO:0003677
Mibi06g0069 706 FunFam Homeobox-leucine zipper protein HDG1 11 98 - -
Mibi06g0069 706 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 24 704 IPR042160 -
Mibi06g0069 706 Gene3D - 3 81 - -
Mibi06g0069 706 ProSiteProfiles 'Homeobox' domain profile. 22 82 IPR001356 GO:0003677
Mibi06g0069 706 ProSiteProfiles START domain profile. 197 455 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0069 Mibi-ChrMibi06 990724 999090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0069 24 704 Homeobox Transcription Factor Family AT1G73360 39.641 1.16e-166 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi06g0069 START 9.9e-30 CL0209