Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0056 ATGGATAAGTCTAAGGTTTCGCTGATTGAGTCTATTAATGATACCACTGATCGTTGGAGGATTGTTGTTCGTGTTTTGCGTCGTTGGAATGTCTACCAGAAGGAATCCCCATCAGATGTGGTAGCTGTTTCGATGCTCTTAGCTGACCAGCTGGCGTCTATCTTGAACAAAGGGCTTTTTGACCGCTATGGCCGTCATCCAGCTGAAGGGAAAACATATTTCATAGCAAACTTCGTTGTTTATCCTAACACCAAGGAGTATCGGGTTGCTAATCATGATTTCCGTATTACTCTTGGTCCACAAACATACATCAAGGAGCTTGAAGGGGCTATTCCAGACTACTCTTACAGCTTCTTTCCTATATCTGACATTCGTAGGGTTGATGAGAAGGAGCCAATTGATTACCTAATTAATGTGATTGGCTATGTTTCATCAATCGGATCTCTTGAAGAGTTTCGTCTGAATGGGGAGACTAAAAATAGGATACGTCTTGGTAGGACTGTGAAATGTGTGCTGTACGATCAGTGCGCTGTTAATGTCTGTCTTACAGACTTTACCAAGCTTGAGCCTCCAATTGTTATGATTATACAGTTAGCACGAATAGGATTTGATGATGAGGGTCTCCCTGAGGTATGTAGCTCATACTATGCTACCAAAGTGTCTATTAATGAAAAGTGCCCAGAGGTGAAACACTTTATTGAGAGCACTAAGGAGCCGCCATCTCCTATAACTACCATCCCACGTCAATCTGCTCCTGCTCAGGGATTGGTACAGTCTGCTTACACTATGCTGCGGTGTAATCGTAGGGCTGATATTGATCAGATTCCACATCAGGAAGACACTTTCTTTGTTATTCACTGTGAGATCATGAAGCTTGAGATGCGCCATGGTTGGATGTACGATGGATGCTCCAAATGTGGTACTAAGCTAAGGTCTGAGAATTCAAAGTTTGTTTGCCTTCAATGCAAAAAGCATCCTACTGCTGTTGAGCCAAAATTCAAGGTTCACTACACAGTGAAAGATGACTCTGGCAGAACCTCTGTAGTCGTTTTTGACAAAGTTGCTGTGCAACTTATTGGGCGTACAGCTCTGGAGCTGAAAGATGTTGATTGTGTGATCTATGATAGTGTGGAACCCAATGCCAACATTTCTTCTGGTCCTCCTCCTTCTTGGACGGAGGCAAATCTTTCTGGTAGCATTGGACTAGACGAGATACCCACTCAGGATGCTGTTGTCAAGACATTTGCTAAGGGGAAAAGGAAGCAATCATGGAAGAAAGTTCCCATCTCTGTTGCAACCCCTGCTACTGCTGCAGCAGCATCTCCTTCAAAGCCTCATGCAAAGCCTAACAAGGCTATTAAGCAAGAGAAGATGTAGTGTCTTTTGTCTGTTTCCTGTGTGTTGTTCTCTGAAGTCAATACTGGCCAAGTGTTGTGGAAGTATGTTATGATGGAAGAAAATTTCACCAGCCCAGATTCATCACCTCCCTTTACATCTCGGTCAGAATATGATGGAAAAGAGAATATTAGCTGCACTCAAGTTTTAGATGTGCTTACCAAGCGCCGGAGGCAAGAATTCTTAAAGTATCGAAGTGATAATGTTCTTAAGGATGTTTCTAATGTTGCTGTCGATCTCCAGTCAAATTTCGATGATGCAGCATCAGGTGCATTTACTAATAAGGTCGACTTGGTTGGTGAATGTGGTACTTCTATGGCAAAGAAAGCAAGTGTGACAAAGAAATCTTTTAGTAGTTGTCAGGTCCAGTCATCTGGAAAACATGTTCAGTCAAATGCTCGAAATCCTGATCCCAGTTTGGCTGTGCATAGTAATGTATCATCATCTCCTATTTCTTTGGTCCAAAGAGCAGGTCTATTTTGTTCAAGTGAACCTCCTTCATACACAGAGTTATACAAACATATTAATTTTGATTACTCATCTAGAAACACATCTGACAGTGAGAGTAGTTTGGACGTTGATGAAGATTTTCACGGTGAGTGTTTTCTTAACAACTTTATTGTGGTGGACACTTACGTATGA 2037 0.4202 MDKSKVSLIESINDTTDRWRIVVRVLRRWNVYQKESPSDVVAVSMLLADQLASILNKGLFDRYGRHPAEGKTYFIANFVVYPNTKEYRVANHDFRITLGPQTYIKELEGAIPDYSYSFFPISDIRRVDEKEPIDYLINVIGYVSSIGSLEEFRLNGETKNRIRLGRTVKCVLYDQCAVNVCLTDFTKLEPPIVMIIQLARIGFDDEGLPEVCSSYYATKVSINEKCPEVKHFIESTKEPPSPITTIPRQSAPAQGLVQSAYTMLRCNRRADIDQIPHQEDTFFVIHCEIMKLEMRHGWMYDGCSKCGTKLRSENSKFVCLQCKKHPTAVEPKFKVHYTVKDDSGRTSVVVFDKVAVQLIGRTALELKDVDCVIYDSVEPNANISSGPPPSWTEANLSGSIGLDEIPTQDAVVKTFAKGKRKQSWKKVPISVATPATAAAASPSKPHAKPNKAIKQEKMXCLLSVSCVLFSEVNTGQVLWKYVMMEENFTSPDSSPPFTSRSEYDGKENISCTQVLDVLTKRRRQEFLKYRSDNVLKDVSNVAVDLQSNFDDAASGAFTNKVDLVGECGTSMAKKASVTKKSFSSCQVQSSGKHVQSNARNPDPSLAVHSNVSSSPISLVQRAGLFCSSEPPSYTELYKHINFDYSSRNTSDSESSLDVDEDFHGECFLNNFIVVDTYV 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0056 678 CDD RPA1_DBD_B_like 138 237 - -
Mibi06g0056 678 Pfam Replication factor-A C terminal domain 282 370 IPR013955 -
Mibi06g0056 678 Gene3D - 257 384 IPR012340 -
Mibi06g0056 678 SUPERFAMILY Nucleic acid-binding proteins 7 108 IPR012340 -
Mibi06g0056 678 Gene3D - 6 109 IPR012340 -
Mibi06g0056 678 PANTHER OS03G0429900 PROTEIN 7 397 - -
Mibi06g0056 678 Pfam Domain of unknown function DUF223 53 108 IPR003871 -
Mibi06g0056 678 SUPERFAMILY Nucleic acid-binding proteins 272 368 IPR012340 -
Mibi06g0056 678 CDD RPA1_DBD_C 271 368 IPR013955 -
Mibi06g0056 678 Gene3D - 110 241 IPR012340 -
Mibi06g0056 678 SUPERFAMILY Nucleic acid-binding proteins 115 237 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0056 Mibi-ChrMibi06 784128 788786 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0056 11 369 Core DNA Replication Machinery Family AT5G08020 22.997 1.74e-11 65.5