Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0044 ATGACGCGTCTTCTTTCATATTATCATTTCTTATCCTCTTCACTTGTCTCTTTTATCACTACTAGAATTTCCCATCTCTTTGTGAACCAAGCTTCTGTGAGTGTTCTTGATAGTACTGCTGTAGCTATGGGTTTACTACCAGTGAGGATTGTTCTGTTTCTCCTCTGCTTCTCCTCCTCTGTTTTGCTACCTCTCTGTCATGGCAAGTCTGATTCATCATCTTCTTCCACATTGAGGTTACTTTTGGAGGTGAAGGAGTCATTCACGGAGGACCCAGAAAATGTTTTGGCTGATTGGTCTGAGAACAACACTGATTACTGTAAATGGAGAGGGATCACCTGTGGGTTGAACTCCACGTTAGTGGTGGCACTCAACCTCTCAGACTCGTCACTCACTGGGTCAATCTCTCCCTCACTCGCTCTCTTACATGACCTGCTCCAACTTGATCTTTCTTCTAACAGCCTCACTGGTCCCATCCCACCTGCTCTCTCCAATCTCTCCTCTTTGGAGTATCTTCTTCTCTTCTCTAACCAACTCACTGGTCACATCCCCACTGAGTTCAACTCGCTCCTGAGTCTCCGAGTCATGCGAATCGGTGACAACCCCTTGACTGGTCCCATTCCTTCCTCCTTTGGGGATTTAGCTAGCCTCGTGACTCTTGGTTTGGCCTCTTGTGATCTCACCGGCTCTATTCCATCTCAACTCGGGAGACTCACTCAGCTTCAGAGCCTTATACTACAAGGTAATGAACTCACTGGTCCGATTCCGCCCGAGTTGGGAAACTGTTCCAACCTCGCTATTTTTACTGCTGCAAATAATGGTCTCAATGGAACTCTTCCGAGTGAACTCGGTGGACTTGAGAATCTTCAGGTTTTGAACCTTGCGAACAACAGTATCACAGGGGAGATTCCGAGTCAACTCGGGAATCTGAGTCAACTCAGTTACTTGAATCTCATGGGCAGCCGACTCGAGGGTCGGATTCCATCGTCCTTGGCTCAATTGGGTAATCTTCAAAATATGGACTTGTCGATGAACAAGCTTGTTGGTGGGATTCCTGAAGAGCTTGGAAACATGGGTGGGTTACAGTTCATGGTTCTTTCTGGGAATCATCTCTCAGGGGTTATCCCAAGAGGTTTGTGTTCCAACTTGACGAGTTTGGAGCATTTGATGTTATCGGATACTGCACTGTCTGGTGAGATTCCCAGTGAGTTAAGCCAGTGTGAATCCATGAAGCAACTTGATTTGTCAAACAATTCCTTGAATGGATCAATACCCATTGAACTCTATGCAATGACTGGGCTGACTGATTTGTTACTCAATAACAACACCTTGATTGGCTCAATCTCTCCTTTCATAGGAAATCTAACCAACCTGGAGACACTTGCATTGTATCACAACAATTTACAGGGTTCTATCCCAAGGGAGATTGGGATGCTGGGGAAGTTGGAAATACTGTATCTTTATGATAACGAATTATCAGGGGAGATTCCTATGGAGATTGGTAACTGCTCAAGCTTGCAGATGATTGATTTCTTCGGAAACAAGTTTGATGGGGAGATTCCCATCACTATTGGAAGGCTCAAGGATCTGAATTTCCTGCATCTCAGACAGAACCAGCTTGTTGGAGAGATTCCACCCACTTTGGGTGGCTGTCATAGCCTAACAATTCTTGATTTAGCGGACAATTATCTCACAGGTGGGATTCCTTCAACGTTTGGATTACTGAAAGATTTGGAGCAACTCATGATGTACAACAATTCACTTGAAGGCAATCTCCCTCACCAACTGATATATCTTAAGAATCTGACAAGGGTGAATCTTTCAAAGAACAGATTGAATGGTAGTTTATCTGCACTCTGCAGCTCTCCCAATTTTCTGTCTTTTGATGTAACTAACAATGCATTTGATGGTGAGATCCCACCCCAGCTGGGGAATTCACATTCTCTGGAGAGGCTAAGGTTGGGAAAGAACAACCTTTCCGGTGAAATACCAAGGACATTGGGGAAAATTGAAGAGCTTTCATTGTTAGACCTGTCTGAAAATTCCCTTACTGGACCAATACCAGCAGAGATTTCCTTGTGCAAGAAGCTAGCTCATATAGATTTGAACAATAACATGCTATCCGGGCCAATTCCATCCTGGCTTGGAAGCTTGCCTCAGTTGGGAGAGCTTAAGCTATCTTTCAATCAATTTTCTGGGAATCCTCCACCAGAGCTATTCACATGTTCTAAATTGTTAGTTCTCTCTTTAAACAGCAACTCTCTTAATGGAAGTATCCCTGATGATATTGGTAATCTCACATCTCTTAATATCCTCAATGTTGAGCAAAACAACTTCTCTGGACCAGTTCCCTCGGCGATCGGGAAGTTAAGCAAGCTTTATGAGCTAAGAATGGCCAGGAACAGCTTTAGTGGTGAGGTTCCTAGTGAGCTTGGAAGGCTGCAGAATCTCCAAAGCATGTTAGACCTCAGTTACAACAATCTCTCTGGGGAAATCCCACCTTCTCTTGGGACACTGGCAAAGTTGGAAGAGCTTGATCTTTCTCACAATCAACTCACAGGACAAGTCCCTCTTCAAGTTGGTGAAATGAGCAGCTTGGGGAAGCTTGATCTTTCCTACAATCACCTTGAAGGTGAGTTAGATGAGCAATTTTCCCACTGGCCAACTAAGGCTTTTGAAGGTAATTCACAACTCTGTGGAAGCCCTCTTAAACACTGCAACACTGAAGGTGGTTCAAGAAATCGTCTGCTAGGCCTGAGTAAAACATCAGTAGTGATAATCTCAGCTCTCTCAACATTAGCAGCAGTTGCACTAGCAATACTTGCAGTAAGAATGTTCATGATGAACAAGCAAGAATTCCTCAGAAAAGGCAGCCAAGTGAGCTATTTTTACTCATCCTCTTCATCATCATCACAAGCACAACGAAGGCCACTCTTCCGGTATAATACAGTGGTGAAGCGTGACATAAGGTGGGAGGACATCATGGAGGCTACTGAAAATCTGAGTGACGAGTTCATAATCGGCTCGGGAGGGTCCGGTACAATCTACAGAGCAGAATTGCCATCAGGAGAAACAGTGGCAGTGAAGAAAATCTCAGGAAAAGATGATTTTATGCAGAACAAGAGCTTTGTGAGGGAAGTGAAGACTCTGGGGAGGATCAGGCATAGACATCTGGTGAAGCTGATGGGTTATTGCAGCAATAAGAACAAAGGAGAAGGATGGAATCTTCTGATATATGAGATGATGGAGAATGGGAGTGTGTGGGATTGGTTGCATGGGAAACCGGAGAAGACCAGAAGAAGCCTTGATTGGGAAGCAAGGTTCAAAATTGCAGTAGGGTTAGCAAGAGGAGTGGAGTACTTGCATCATGACTGTGTGCCAAAGATCATCCACAGAGATATCAAATCCAGCAATGTGTTGTTAGATTCCAGAATGGAGGCTCACTTGGGAGATTTTGGATTGGCAAAAGAACTCAACTTTGACAACTCCAACACCGAGTCTAATTCTTGGTTTGCTGGGTCCTATGGCTATATTGCTCCAGAGTGTGCATACTCACTGAAGGCAACAGAGAAGAGTGATGTGTACAGTATGGGGATAGTGTTAATGGAACTGGTGAGTGGGAAGATGCCAACAGATGAAGTATTTGGAGGAGAAATGGATATGGTGAGATGGGTTGAGATGAACATTGAGATGCACTCTCAGGATTTGGTTGATCCTCTTCTCTTGCCTCTCACACCTGCTCAGCAGTTTGCAGCATTCCAAGTGCTTGAGGTTGCCTTGCACTGCACCAAAATGACGCCGCTTCAGAGACCTTCCTCACGCCAAGTCTGTGATCTCCTCCTCCGTGTCTTCAGCAACAGAGTCCTTGACTTTGACAAGATCAATTTGAATCCCCACGAGTGA 3903 0.4468 MTRLLSYYHFLSSSLVSFITTRISHLFVNQASVSVLDSTAVAMGLLPVRIVLFLLCFSSSVLLPLCHGKSDSSSSSTLRLLLEVKESFTEDPENVLADWSENNTDYCKWRGITCGLNSTLVVALNLSDSSLTGSISPSLALLHDLLQLDLSSNSLTGPIPPALSNLSSLEYLLLFSNQLTGHIPTEFNSLLSLRVMRIGDNPLTGPIPSSFGDLASLVTLGLASCDLTGSIPSQLGRLTQLQSLILQGNELTGPIPPELGNCSNLAIFTAANNGLNGTLPSELGGLENLQVLNLANNSITGEIPSQLGNLSQLSYLNLMGSRLEGRIPSSLAQLGNLQNMDLSMNKLVGGIPEELGNMGGLQFMVLSGNHLSGVIPRGLCSNLTSLEHLMLSDTALSGEIPSELSQCESMKQLDLSNNSLNGSIPIELYAMTGLTDLLLNNNTLIGSISPFIGNLTNLETLALYHNNLQGSIPREIGMLGKLEILYLYDNELSGEIPMEIGNCSSLQMIDFFGNKFDGEIPITIGRLKDLNFLHLRQNQLVGEIPPTLGGCHSLTILDLADNYLTGGIPSTFGLLKDLEQLMMYNNSLEGNLPHQLIYLKNLTRVNLSKNRLNGSLSALCSSPNFLSFDVTNNAFDGEIPPQLGNSHSLERLRLGKNNLSGEIPRTLGKIEELSLLDLSENSLTGPIPAEISLCKKLAHIDLNNNMLSGPIPSWLGSLPQLGELKLSFNQFSGNPPPELFTCSKLLVLSLNSNSLNGSIPDDIGNLTSLNILNVEQNNFSGPVPSAIGKLSKLYELRMARNSFSGEVPSELGRLQNLQSMLDLSYNNLSGEIPPSLGTLAKLEELDLSHNQLTGQVPLQVGEMSSLGKLDLSYNHLEGELDEQFSHWPTKAFEGNSQLCGSPLKHCNTEGGSRNRLLGLSKTSVVIISALSTLAAVALAILAVRMFMMNKQEFLRKGSQVSYFYSSSSSSSQAQRRPLFRYNTVVKRDIRWEDIMEATENLSDEFIIGSGGSGTIYRAELPSGETVAVKKISGKDDFMQNKSFVREVKTLGRIRHRHLVKLMGYCSNKNKGEGWNLLIYEMMENGSVWDWLHGKPEKTRRSLDWEARFKIAVGLARGVEYLHHDCVPKIIHRDIKSSNVLLDSRMEAHLGDFGLAKELNFDNSNTESNSWFAGSYGYIAPECAYSLKATEKSDVYSMGIVLMELVSGKMPTDEVFGGEMDMVRWVEMNIEMHSQDLVDPLLLPLTPAQQFAAFQVLEVALHCTKMTPLQRPSSRQVCDLLLRVFSNRVLDFDKINLNPHE 1300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0044 1300 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 328 426 - -
Mibi06g0044 1300 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 521 617 - -
Mibi06g0044 1300 Gene3D Transferase(Phosphotransferase) domain 1 1082 1283 - -
Mibi06g0044 1300 FunFam Leucine-rich repeat receptor-like protein kinase 1082 1296 - -
Mibi06g0044 1300 ProSitePatterns Protein kinases ATP-binding region signature. 1007 1030 IPR017441 GO:0005524
Mibi06g0044 1300 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 538 1279 - -
Mibi06g0044 1300 Gene3D Ribonuclease Inhibitor 190 271 IPR032675 -
Mibi06g0044 1300 Pfam Leucine rich repeat N-terminal domain 80 114 IPR013210 -
Mibi06g0044 1300 SMART LRR_typ_2 527 551 IPR003591 -
Mibi06g0044 1300 SMART LRR_typ_2 166 189 IPR003591 -
Mibi06g0044 1300 SMART LRR_typ_2 599 622 IPR003591 -
Mibi06g0044 1300 SMART LRR_typ_2 863 894 IPR003591 -
Mibi06g0044 1300 SMART LRR_typ_2 479 503 IPR003591 -
Mibi06g0044 1300 SMART LRR_typ_2 839 861 IPR003591 -
Mibi06g0044 1300 SMART LRR_typ_2 286 310 IPR003591 -
Mibi06g0044 1300 SMART LRR_typ_2 455 478 IPR003591 -
Mibi06g0044 1300 SMART LRR_typ_2 358 382 IPR003591 -
Mibi06g0044 1300 SMART LRR_typ_2 238 262 IPR003591 -
Mibi06g0044 1300 SMART LRR_typ_2 383 407 IPR003591 -
Mibi06g0044 1300 SMART LRR_typ_2 790 814 IPR003591 -
Mibi06g0044 1300 SMART LRR_typ_2 718 742 IPR003591 -
Mibi06g0044 1300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1129 1141 IPR008271 GO:0004672|GO:0006468
Mibi06g0044 1300 PRINTS Leucine-rich repeat signature 839 852 - -
Mibi06g0044 1300 PRINTS Leucine-rich repeat signature 410 423 - -
Mibi06g0044 1300 Gene3D Phosphorylase Kinase; domain 1 960 1081 - -
Mibi06g0044 1300 Gene3D Ribonuclease Inhibitor 272 431 IPR032675 -
Mibi06g0044 1300 Gene3D Ribonuclease Inhibitor 572 910 IPR032675 -
Mibi06g0044 1300 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 960 1081 - -
Mibi06g0044 1300 ProSiteProfiles Leucine-rich repeat profile. 288 311 IPR001611 GO:0005515
Mibi06g0044 1300 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 618 910 - -
Mibi06g0044 1300 Gene3D Ribonuclease Inhibitor 432 505 IPR032675 -
Mibi06g0044 1300 ProSiteProfiles Protein kinase domain profile. 1001 1284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0044 1300 SUPERFAMILY RNI-like 672 907 - -
Mibi06g0044 1300 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 234 327 - -
Mibi06g0044 1300 SUPERFAMILY L domain-like 87 424 - -
Mibi06g0044 1300 Gene3D Ribonuclease Inhibitor 77 189 IPR032675 -
Mibi06g0044 1300 Gene3D Ribonuclease Inhibitor 506 571 IPR032675 -
Mibi06g0044 1300 Pfam Protein kinase domain 1006 1277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0044 1300 SUPERFAMILY Protein kinase-like (PK-like) 983 1280 IPR011009 -
Mibi06g0044 1300 FunFam Uncharacterized protein 427 520 - -
Mibi06g0044 1300 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 74 233 - -
Mibi06g0044 1300 Pfam Leucine Rich Repeat 288 310 IPR001611 GO:0005515
Mibi06g0044 1300 SMART serkin_6 1001 1284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0044 1300 SUPERFAMILY RNI-like 366 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0044 Mibi-ChrMibi06 635786 639998 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0044 81 743 Receptor kinase-like Gene Family AT1G17750 36.771 3.30e-104 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi06g0044 Pkinase 1.8e-43 CL0016