Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0021 ATGTATCAGCCAAACAGTGTTCCTAGTTCAAGTCTACTTGGAAGCAACTCCATACATGGTCAGCAATTTGATCGTGGTGGTAGTACTATGGACCCAGTCCATGGAGGGAACAGTCTCGCCAACAACCCCAATCTGAGCTCAAAGCAACGGCTACGCTGGACACATGAGCTCCACGACCGCTTTGTTGATGCTGTGGCTCAGCTTGGCGGACCTGATCGTGCCACACCTAAAGGTGTCCTCAGAGTGATGGGTGTACAAGGCTTAACAATATATCATGTCAAAAGCCATCTGCAGAAATATCGTCTTGCTAAATACCTCCCTGATTCCTCATCTGATGGGAGAAAAGCCGACAAGAAAGAAACTGGGGATATGCTTTCCAATCTGGATGGTTCACCAGGGATGCAAATTACTGAAGCGCTTAAGCTGCAAATGGAGGTGCAGAAGCGACTACATGAGCAATTAGAGGTTCAGAGACAGCTACAACTTCGGATTGAAGCTCAGGGTGAATACTTGAAGAAGATAATTGAAGAGCAACAGCGGCTCAATGGCGTTATCCCTCAAGCACCCGGCTTAGGGGATGCTGCCTCGGTGCCGGGTGACTCCTACCAGGACCTTGACAATAAGAATGACCCTTCAACACCGGCACCTACATCTGAGTGTCCTCTTCAGGATAAAGTTGCTAAAGAACGTGCTCCGGCGAAAAGTCTTTCAATTGACGAATCCTTGTCATCTCACAATGAACCATTAACACCAGATTCTGGCTGCCATGCTGGTTCCCCTGCCAACAGCCCTGGTGAGAAGAGAATGATAAAAAAGCATCAGGTGAGCATGGAGGGAGCATATTCTAAACCTAAAATGGTACTTCCTCATCATATACTTGAGTCGAGCTTGTCCTCAAGTCAGCCATTAAGTGGAGTGTTTCCTACCAATGAGCAGTTTGACCGTTCACTAGGAATACCTACCAGGAGTGATGAGGAGCTGGAGAAGGTTGGCGGGGGAAATCTGTGA 1008 0.4792 MYQPNSVPSSSLLGSNSIHGQQFDRGGSTMDPVHGGNSLANNPNLSSKQRLRWTHELHDRFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGRKADKKETGDMLSNLDGSPGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGEYLKKIIEEQQRLNGVIPQAPGLGDAASVPGDSYQDLDNKNDPSTPAPTSECPLQDKVAKERAPAKSLSIDESLSSHNEPLTPDSGCHAGSPANSPGEKRMIKKHQVSMEGAYSKPKMVLPHHILESSLSSSQPLSGVFPTNEQFDRSLGIPTRSDEELEKVGGGNL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0021 335 MobiDBLite consensus disorder prediction 108 124 - -
Mibi06g0021 335 MobiDBLite consensus disorder prediction 107 132 - -
Mibi06g0021 335 MobiDBLite consensus disorder prediction 297 335 - -
Mibi06g0021 335 SUPERFAMILY Homeodomain-like 46 102 IPR009057 -
Mibi06g0021 335 Pfam MYB-CC type transfactor, LHEQLE motif 134 180 IPR025756 -
Mibi06g0021 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 105 IPR017930 -
Mibi06g0021 335 MobiDBLite consensus disorder prediction 186 272 - -
Mibi06g0021 335 MobiDBLite consensus disorder prediction 202 219 - -
Mibi06g0021 335 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 46 323 IPR044848 GO:0003700
Mibi06g0021 335 MobiDBLite consensus disorder prediction 297 317 - -
Mibi06g0021 335 Pfam Myb-like DNA-binding domain 51 101 IPR001005 -
Mibi06g0021 335 MobiDBLite consensus disorder prediction 1 24 - -
Mibi06g0021 335 Coils Coil 137 157 - -
Mibi06g0021 335 MobiDBLite consensus disorder prediction 1 46 - -
Mibi06g0021 335 Gene3D - 47 106 - -
Mibi06g0021 335 FunFam Myb family transcription factor 47 105 - -
Mibi06g0021 335 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 48 103 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0021 Mibi-ChrMibi06 362352 365289 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0021 83 335 G2-like Transcription Factor Family AT2G01060 64.314 1.36e-99 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi06g0021 Myb_DNA-binding 4.8e-08 CL0123