Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2676 ATGTCCTCGCAACCAATTCCAAATGATTCTGTGGAAGCTGATCTCAACGCTTCCTTGCTCGTCGGTACTAGCAAGTACGTCCGGCTATGGCGCCGCACTTTTTACATTCGAATCTTCATCTCTCTCACTCGAACCAAAAGAATCACTACCACCACCACCACTACTACAACTACTTTTACGCACGGATCTCAGCAACTAACTAATTACACTCCATTACTTCCCGCGAGAACTTCCTCTGCTAAATCTTCTCTTGCCATTGACATTAACGAAGAGGACTGTTTAGAGCAGTGCATTAAGAATGAAATTGCTCAAATCGTTAAGGCCAAGGACTATGAATCCCTTCGTCAACTCGGCGGAATCCACCGTGTTCGCTCACTTCTTACTCCTACTCCTACTCCATCTGAGGAGGGTTACACTGTTGATGGGAACCATCAAGTGTTGGAGAACACCAACAAAGCTAATGGACGGAGCCTTTCGTACTATTTTGTGAATAGTTGCAAACGCAATAGTTATACAATTTCACTATTTATGATCTCAGCTATGTTGTGCTTGGCCACAGAGATCAAGCAGGAAGGACCCAAATATGGTTGGCATGATAGTGTTGCCATACTTGTTGCCATTATCATGATTGTCTCTTCCTCTTCGATGGCAAACTTTTGGGGTGAAAGAAAGATGGGTGACGAGGTTCCAGCTGATGGTTTGATTCTAAATAATGAAAATGAGACGCCTGATCCATTTCTCTTGTTTGGCTCAAGAGTATTGTTTGAGGGTGAAACTTTTATGCTTGTAACATCATTACTTAGAGGCGAAATATCAGTTGACATGCAGCATTCAGCGGCAAACAATCCTGAAAGGAATATTTTGTTGGAAAGCCGAATCGAGAGGCCGATTTCTTTTGTTGACAAAGTTGCCCTTCTTATCTCTGCATTGGTTATGCTTGTGGTGCTCATACGTCTGCTTGGAAAGAAAGATAGGGACAACAGTGGTGGGTCACCAAAAATTAAGGGTCAGTCCAGTGCAACAATGGGACTGGTCACAATCATCTGTGTTGACGCATCTGGTGGGCTCATGTCTAAACCGATGGAGGTTAGTAGAATTCGGATTGGGGAGAGAGATATCAGCAATGATGTGACGTCTGAAATTAATCAGGAGTTGCTCGACAAAATTCAGCAAGGAGCTGGCGTATTTGTTCTTTCTCCGGAGCTTATTCTTTCTCCTTTGTCCAATTCTCTTATTTCTTGGGCAGAAACCACTTGGGGCCTGAATAGAGAATCTCTTGGTCAAAACCTAACCATTCTTCAGCATAGCAGACAAAATTGCAAGGCACATGGAAATGGAGCTTTGGTGAGAAGAGTTGGAGACCATGAAAGAGATCTGCACTCGCACTGGAGTGGGGCAGCATCTACGATACTGGAAATGTGTTCACACTACTATGATATCAGTGGGGAATACCATGATATAACAAATCAGAAGATCGAATTTGGGAAGGTCATTAAAGAAATGGAGGATAGTGGCCTTGAGCCTATCGCGCTTGCTTATCGGAAGACGGAGGCTCAGGAACTTCAGGAAGATGGACTGATCTTGCTAGCCCTGATAGGTCTCAAACACTCATGTCTTGAAGAGATAAAGAGAGCATTGGCACGCCTAAAAAGCGATGGAATCAAGATCAAATTGGTGTCAGAGCAAGACATTGAGGCAGTGAAAGCCTTGGCTTGTGAACTAGGAATAGAAGTTCCCGTTGAAGATGGTTTTATTCTTGAAGGAAAAGAAATCCAAGATTTGAATAGCAAAGCGGTAAGGTCAAAGATGTTGGATAAAGCACTTGTAATGGGAGGTTTCCTCCCTCGTGATAAGGTACTCATGATTAAGTGTTTGAAAGATGAAGGTCACGTGGTTGCATTCTTTGGAGGGTTGACAGTTAGTGATACTGCAGTTCGAGAGGCAGTTGATATAGTGATAGATGTAAAGTCTCAGATCCCAAAATCTGATATGGAGAGTTCGAACATATCTATCGAATGTTTCAGTGCAATAACTACAATGGAGGATCAGGATGCCAGCCAACCAAATCACAGGAAGCAGTCACTAATAACACTAGAAATCTGGAAAGACATAGCTATTGATGTCTTGTATCAAGCTTCTGTTTCATTGATATTTCTTTTTGGAGGACTAGTTGTGGTCATTCAATATGCAAATAGCCTAGCAGATTGCATGAGTCTAACTCCAATTCAGTGGCTAATCTGTATCGTTTGTTTTCGGCCACGTGCAAATGTAACGCACGCTCCCACCTGTGGCACTCAAGTATTGATGAAACATAACATAAATCGTCAGAAGAGCCAGCAAGCAAGCTTTCATTGGAATTGGATGGCTACATGTGCTATTCAACAATCGGCCTTCATCGGCCAAACTGCATCCAAGCAGGCCAATGAGCTCCTCCGTAAGGCCGGTCCCTCCGGAAACGGCCGCTTCACCATGCGCCGCACCGTCAAGAGCGCTCCTCAGAGCATCTGGTATGGGCCTGACCGGCCCAAGTACCTGGGCCCGTTCTCGGAGCAGATACCGTCGTATCTGACGGGAGAGTTCCCGGGGGACTACGGGTGGGACACGGCGGGGTTGTCGGCGGACCCGGAGACGTTTGCGAGGAACCGTGAGCTGGAAGTGATCCACAGCAGGTGGGCCATGCTTGGGGCTTTGGGATGTGTCTTCCCAGAGGTTCTGGAGAAGAACGGCGTGAAGTTCGGTGAGGCCGTTTGGTTCAAGGCCGGCGCTCAGATCTTCTCCGAGGGAGGCCTTGACTATCTCGGCAACCCCAACCTCATCCATGCCCAGAGCATCCTCGCCATCTGGGCTGTTCAGGTTGTTTTGATGGGATTCGTGGAAGGGTACAGGGTTGGAGGAGGGCCCCTTGGTGAAGGGCTCGACCCGATCTACCCGGGCGGAGCATTCGACCCGCTTGGCCTGGCCGATGACCCGGATGCATTTGCCGAGTTGAAGGTCAAGGAGCTCAAGAATGGGAGATTGGCTATGTTCTCCATGTTTGGTTTCTTCGTTCAGGCCATTGTCACTGGCAAAGGTCCCATTCAGAACCTCTTCGATCATCTTGCTGACCCTGTTGCCAACAATGCCTGGGCTTATGCCACTAACTTCGTCCCTGGTCAATGA 3159 0.4679 MSSQPIPNDSVEADLNASLLVGTSKYVRLWRRTFYIRIFISLTRTKRITTTTTTTTTTFTHGSQQLTNYTPLLPARTSSAKSSLAIDINEEDCLEQCIKNEIAQIVKAKDYESLRQLGGIHRVRSLLTPTPTPSEEGYTVDGNHQVLENTNKANGRSLSYYFVNSCKRNSYTISLFMISAMLCLATEIKQEGPKYGWHDSVAILVAIIMIVSSSSMANFWGERKMGDEVPADGLILNNENETPDPFLLFGSRVLFEGETFMLVTSLLRGEISVDMQHSAANNPERNILLESRIERPISFVDKVALLISALVMLVVLIRLLGKKDRDNSGGSPKIKGQSSATMGLVTIICVDASGGLMSKPMEVSRIRIGERDISNDVTSEINQELLDKIQQGAGVFVLSPELILSPLSNSLISWAETTWGLNRESLGQNLTILQHSRQNCKAHGNGALVRRVGDHERDLHSHWSGAASTILEMCSHYYDISGEYHDITNQKIEFGKVIKEMEDSGLEPIALAYRKTEAQELQEDGLILLALIGLKHSCLEEIKRALARLKSDGIKIKLVSEQDIEAVKALACELGIEVPVEDGFILEGKEIQDLNSKAVRSKMLDKALVMGGFLPRDKVLMIKCLKDEGHVVAFFGGLTVSDTAVREAVDIVIDVKSQIPKSDMESSNISIECFSAITTMEDQDASQPNHRKQSLITLEIWKDIAIDVLYQASVSLIFLFGGLVVVIQYANSLADCMSLTPIQWLICIVCFRPRANVTHAPTCGTQVLMKHNINRQKSQQASFHWNWMATCAIQQSAFIGQTASKQANELLRKAGPSGNGRFTMRRTVKSAPQSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEVLEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLFDHLADPVANNAWAYATNFVPGQ 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2676 1052 SUPERFAMILY Chlorophyll a-b binding protein 835 1049 - -
Mibi05g2676 1052 SUPERFAMILY HAD-like 526 636 IPR036412 -
Mibi05g2676 1052 Gene3D - 439 530 IPR023299 GO:0000166
Mibi05g2676 1052 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 451 534 IPR023299 GO:0000166
Mibi05g2676 1052 FunFam Chlorophyll a-b binding protein, chloroplastic 843 1045 - -
Mibi05g2676 1052 Pfam Chlorophyll A-B binding protein 853 1018 IPR022796 -
Mibi05g2676 1052 Gene3D - 531 673 IPR023214 -
Mibi05g2676 1052 Gene3D Chlorophyll a/b binding protein domain 843 1045 - -
Mibi05g2676 1052 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 792 1051 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2676 Mibi-ChrMibi05 51898530 51903975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2676 788 1052 Chloroplast and Mitochondria Gene Families AT2G05070 87.170 1.41e-171 501