Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2672 ATGCACATGGTTTCTTCAGACAAAAGTGCTGATCCAGATGTTTCTTCTGATAAATTGCATCAGAGGCTGAGTTCTCAAAGCGATATTACTGTGTCACAAGAGACTTGTGATGATAAAATTGATTCATCCAAACCGGAGGGGCCAAGAAGAATTCCTTCTGTTGCAGCTGAGAAAGAAGTGCAGGATTCTGATGCGACTCCTGATGCACTGCAATCAGATCAGGAAGGAAGTGCTTGTACTTCACCACTTCAGAGATCTTTGCAGAGTCCTAATACCGAACAGTGTCTGTTTCAATCTAGTGAGGATAGTCTCTCTATAATGTGTGAAAAAAGCTCAAAAGACAGAGTAGCTGGAAAAGGAGTGTTAGATTCTGATTCTACTGCCAATGCAGGAAAATCAGAACAAAGGAGTGCATACTCTTTACATGAGAAACCCTTGCAAAATCCTAGTAGCATTCCACGTGCATCACATTGCGGTCAGGATGGTCCCTCTATAGCTCGTGAAAAAGTCTCAAAGGATGGATATAATTGGCGAAAATATGGTCAAAAAAATGTTAAGGGCAATGAATATATAAGGAGCTATTACAAGTGCACACATCCCAACTGCCCAGCAAAGAAGCAATTGGAACAGTCAAATAATGGAAAGATTGAAGATACCATTTGCATTGGTCAGCATAATCATCCCCAAGTGAACTGCTCACGGCCTGTTGAAGAAAAATCAAATAAGCCCTCTATAGCCGATATTAAAGACAAAACATCCATTGAACATGGATGTGTGCCTCAACAGATCAGGTCTCTAGAAATTCATTCAGCTTCAACAGCTTCCACAATTAATGAGGTCAAAGTTGAACCTTTACAGTCGATCAAAACAAGGGATTTGGTTCTTGCTAATGAGGATCCTGAGTCAAAACGCCTGAAGAAAAACAGTAGTAATGCTGACACCCCTGTTGTTGAGAAGTCAGTTGGTGATTCTCGTTTTGTTGTTCAGACTTCAAGTGAGGTTGATTTTATTAATGATGGGTACCGTTGGCGTAAGTATGGGCAGAAACTAGTAAAAGGAAATCCAAATCCAAGAAGTTATTACCGGTGCTCGAGTCCCGGATGTCCTGTCAAAAAGCATGTGGAAAGGGCCTCTCATGATCAAAAAATTGTGATAACCACCTATGAGGGACATCATGATCATGATAGCCCCTCCGGAAGGACCGTTATTCATAATGGAGCACCAGATACTTCCGCAACAATCATCAACAGCGATTTGGGATTGAAATCTGGGGAAAACTCTGTTTGTGTTCATCCAGTTGAACAACAGATTTGCTTGACCTTAGAAAGCAGCAGGTCACAGGAGCAACCAAATGGAGAGCAAATTGCTAAACCAAAGACTTGTGACATGGATGAATCTCAAGGGATTTCTTCTCAAGTCTCTGAAAGTCCTACAAGTGAGAAAGAACAAAATGGCAACGTAAGGGTGGGAAATGATTCATGTTCTGAGCCTCCATGTAGATTAAACAAGCAACAGAAAGATGAAGTAAAAGCCATATCAGAAGAAACTAAGTTAAACAAGCAATCTGAAGCTGATGCGGAACCTGTCCAAAGCTAA 1596 0.4117 MHMVSSDKSADPDVSSDKLHQRLSSQSDITVSQETCDDKIDSSKPEGPRRIPSVAAEKEVQDSDATPDALQSDQEGSACTSPLQRSLQSPNTEQCLFQSSEDSLSIMCEKSSKDRVAGKGVLDSDSTANAGKSEQRSAYSLHEKPLQNPSSIPRASHCGQDGPSIAREKVSKDGYNWRKYGQKNVKGNEYIRSYYKCTHPNCPAKKQLEQSNNGKIEDTICIGQHNHPQVNCSRPVEEKSNKPSIADIKDKTSIEHGCVPQQIRSLEIHSASTASTINEVKVEPLQSIKTRDLVLANEDPESKRLKKNSSNADTPVVEKSVGDSRFVVQTSSEVDFINDGYRWRKYGQKLVKGNPNPRSYYRCSSPGCPVKKHVERASHDQKIVITTYEGHHDHDSPSGRTVIHNGAPDTSATIINSDLGLKSGENSVCVHPVEQQICLTLESSRSQEQPNGEQIAKPKTCDMDESQGISSQVSESPTSEKEQNGNVRVGNDSCSEPPCRLNKQQKDEVKAISEETKLNKQSEADAEPVQS 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2672 531 MobiDBLite consensus disorder prediction 65 94 - -
Mibi05g2672 531 MobiDBLite consensus disorder prediction 464 491 - -
Mibi05g2672 531 MobiDBLite consensus disorder prediction 1 94 - -
Mibi05g2672 531 SMART WRKY_cls 171 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g2672 531 SMART WRKY_cls 337 396 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g2672 531 Gene3D WRKY domain 164 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi05g2672 531 ProSiteProfiles WRKY domain profile. 332 397 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g2672 531 MobiDBLite consensus disorder prediction 34 64 - -
Mibi05g2672 531 MobiDBLite consensus disorder prediction 112 163 - -
Mibi05g2672 531 SUPERFAMILY WRKY DNA-binding domain 168 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi05g2672 531 FunFam WRKY transcription factor 57 323 397 - -
Mibi05g2672 531 FunFam WRKY transcription factor 161 231 - -
Mibi05g2672 531 MobiDBLite consensus disorder prediction 501 522 - -
Mibi05g2672 531 SUPERFAMILY WRKY DNA-binding domain 329 397 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi05g2672 531 MobiDBLite consensus disorder prediction 441 531 - -
Mibi05g2672 531 Gene3D WRKY domain 324 390 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi05g2672 531 Pfam WRKY DNA -binding domain 338 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g2672 531 Pfam WRKY DNA -binding domain 172 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g2672 531 MobiDBLite consensus disorder prediction 126 157 - -
Mibi05g2672 531 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 102 442 IPR044810 GO:0003700
Mibi05g2672 531 ProSiteProfiles WRKY domain profile. 166 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g2672 531 MobiDBLite consensus disorder prediction 19 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2672 Mibi-ChrMibi05 51787301 51790483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2672 130 410 WRKY Transcription Factor Family AT2G04880 50.000 6.94e-82 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi05g2672 WRKY 1.8e-25 CL0274