Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2613 ATGGAAGCCGTTGCTGATAAAGTCATTGGGCTATTGGGCTCTCTGGCTTATGAAGAGCTTTGCATCATTTGGAACTTTCAAGATGATGTGGAGAGCATGAAGAGCATGGTCAGTGCAATCAAATCCGTACTCCTTGATGCTGAGAAAAAGGCCACAAGAAGTCATCAAATCAATGATTGGCTACAGAAGCTGAAAGATGTGCTGCTTGATGCAGAGGACTTGTTGGATGCCTTCTTAGCTGATGAGCTTGCAAGGGAAGTGATGACCAAAGGCAAAATTGGGAAGGAGGTACGTATATTCTTCTCCAAATCCAATCGAATTGTTTGTGCTGCCAAATTGGGCCGTGAAATCAAGGCCCTCAGGAAGAAACTTGATGGCATTTCCAATGACATGAAAAGTTTGCATTTGAGTGAAATCTCCTCCATTGATGAGTCTAATTATGAATGGAGGCAAACCCACTCGTTTGTGAGGGAGGAAGATGTTGTAGGGAGAGACAATGAAAGGATGCAACTTGTTGGCATCCTTTTAGACCCCCCTGACGATGTTGTGAAAAATAATAATGTTTCAGTAGTAGCCATAGTTGGGATTGGGGGAATGGGGAAGACTACACTTGCCCAACGAGTCTATAATGATGAGGCTGTCAAAAGGCATTTTGAGCTAATGAAGTGGGTTTGTGTGGCTGATGAATCCACTGATAATAAATTTAGCTTTAAGAGAGTAGCTGAACAAATCATTGAGCAGAAATATGATAAGATGGACCAAGTGGTACAGGAATTAAGGAGTATGATTGAGGGGAAACGTTTTCTGCTTGTGTTAGATGACGTTTGGAATGAGGAGCGTAAGGAATGGGTTGACTTAGAAAACATGTTGAAGGGAGGAAGAAAGGGAAGTGTGATCATTGTGACCACACGCAGTGAGAAGGTGGCACAAATAATGATCACACACTCGCATCTTCTTATTTCCATAGAAGGCTTGAATGATAAGAACTCTTGGGAGTTATTTTGTAGAGAGGCTTTTCGCGAGGGGAAAGAACCTGATAATCAAGAGTTGGTAGATATTGGAAGGGATATTGTGCGCAAATGTGCTGGAGTTCCCCTAGCAATTAGAACTATTGCCAGCCTTCTGTACAACAAAAAGCGAGTGAGTGAATGGTCATATTTTAGGAACAATGAACTTGCAAACATAGATCCTGAGGGTAACAAAATCCTTTCTATCCTTAAACTTAGTTATGATCATCTTCCCTCCCATTTGAAAAACTGCTTTGCATTTTGTTCTCTCTTTCCAAAAGATTATGAGATTAGGAGAGTAGAGCTTATTAGGCTATGGATGGCTGAGGGGTTCATTCAACCCTTAGACAAAAATAGGCGCTTGGAAGATGTTGGGGAAGAGTACTTCATGCAGTTATTGTTAAGATGCTTGCTTCAAGATGTGAGTCAAGATTATCTTGGTGACATATCGACATGTAAGATGCATGACCTCATTCATGATCTAGCACAATCAGTTTCTAAAACTGAATATTTCTCTGTCACAAGTGAAGGGATAGAAGAAGAGCACATTGGTGATGGGATCCGTCACATGGCAATTCACTTTCTTAGGGATTGGGAGGTTAAGGTTGATAATGTCAAGACCAAAAAAGTCAGAACAATTTTGGATTTCAATCTAGAATGCTCTGTGAGAGGATATATTGTGCCAATTTTTGTAACAATGAAGAACCTACGTGTATTGGATCTTCGCGCTTATGGGTTGGAAGTAATTCCAGAGAGTATAGGATACTTGAAGCATTTGAGATATCTTGATTTAAGTAGGAATGTTGCACTCGAAAGGCTTCCACGAGGAATTACCAGGTTGCATAACCTATTAACGCTGAAACTTAATGGTTGTGAAGGATTAAGAGAATTGCCTAAAGATGTGAAGAGATTGGTAAGACTTAGACATCTTGAATTGTATGGTTGTGATTCACTGGTATGTATGCCATGCGGTTTGGGAAGTCTGACTAATATCCAAACGCTGACCAACTTTGTGGTGGGCGAAAGGAAGAGTGGGGGTGCAAAGGTAAGTGAGCTACGTGATCTGGTTTGGTTGAAGGGAGAACTCGAAATTGATCAGCTTCAAAGGCTGCGAAGTAATATAAAGGAGGTTGAGTCATCAAAGTTTCTAATTCACACACAACATCTTGAATCATTGTTATTACGTTGGGTACTGGAGGAAGAAGAGGAGGAGCACAAGGAGGATGAGATGATTTTAGAAGCTTTAGAGCCACCTCACACAATCAAATCACTGACTGTTAGTGGATTCCGGAGGAAACAATTGTCAGAGTGGATATGTAGTCTCACATCGTTGCAAGTGCTAGATCTCTTCCATTGCACTTCTTTGGCATCACTTCCAAAGTCCTTTGGGAACCTCATATCGTTGCAAAGCCTAACTCTCATGTTTTGCAATACTTTGGCATCACTTCCAGAGTCTATTGGAAACCTCACATCATTGCAATCGCTAAGACTGGGGGGTTGCTGTGCTTTGGCATCACTTCCCAACTTAATGATGTAA 2544 0.4127 MEAVADKVIGLLGSLAYEELCIIWNFQDDVESMKSMVSAIKSVLLDAEKKATRSHQINDWLQKLKDVLLDAEDLLDAFLADELAREVMTKGKIGKEVRIFFSKSNRIVCAAKLGREIKALRKKLDGISNDMKSLHLSEISSIDESNYEWRQTHSFVREEDVVGRDNERMQLVGILLDPPDDVVKNNNVSVVAIVGIGGMGKTTLAQRVYNDEAVKRHFELMKWVCVADESTDNKFSFKRVAEQIIEQKYDKMDQVVQELRSMIEGKRFLLVLDDVWNEERKEWVDLENMLKGGRKGSVIIVTTRSEKVAQIMITHSHLLISIEGLNDKNSWELFCREAFREGKEPDNQELVDIGRDIVRKCAGVPLAIRTIASLLYNKKRVSEWSYFRNNELANIDPEGNKILSILKLSYDHLPSHLKNCFAFCSLFPKDYEIRRVELIRLWMAEGFIQPLDKNRRLEDVGEEYFMQLLLRCLLQDVSQDYLGDISTCKMHDLIHDLAQSVSKTEYFSVTSEGIEEEHIGDGIRHMAIHFLRDWEVKVDNVKTKKVRTILDFNLECSVRGYIVPIFVTMKNLRVLDLRAYGLEVIPESIGYLKHLRYLDLSRNVALERLPRGITRLHNLLTLKLNGCEGLRELPKDVKRLVRLRHLELYGCDSLVCMPCGLGSLTNIQTLTNFVVGERKSGGAKVSELRDLVWLKGELEIDQLQRLRSNIKEVESSKFLIHTQHLESLLLRWVLEEEEEEHKEDEMILEALEPPHTIKSLTVSGFRRKQLSEWICSLTSLQVLDLFHCTSLASLPKSFGNLISLQSLTLMFCNTLASLPESIGNLTSLQSLRLGGCCALASLPNLMM 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2613 847 CDD RX-CC_like 2 129 IPR038005 -
Mibi05g2613 847 Pfam Rx N-terminal domain 8 87 IPR041118 -
Mibi05g2613 847 Pfam NB-ARC domain 183 411 IPR002182 GO:0043531
Mibi05g2613 847 Gene3D Ribonuclease Inhibitor 537 846 IPR032675 -
Mibi05g2613 847 Gene3D - 145 319 IPR027417 -
Mibi05g2613 847 Gene3D - 324 409 IPR042197 -
Mibi05g2613 847 SUPERFAMILY L domain-like 489 843 - -
Mibi05g2613 847 Gene3D - 5 134 - -
Mibi05g2613 847 Coils Coil 110 130 - -
Mibi05g2613 847 PRINTS Disease resistance protein signature 361 375 - -
Mibi05g2613 847 PRINTS Disease resistance protein signature 775 791 - -
Mibi05g2613 847 PRINTS Disease resistance protein signature 262 276 - -
Mibi05g2613 847 PRINTS Disease resistance protein signature 190 205 - -
Mibi05g2613 847 PANTHER DISEASE RESISTANCE PROTEIN RP 52 767 IPR044974 GO:0006952
Mibi05g2613 847 FunFam Probable disease resistance protein At1g63360 410 500 - -
Mibi05g2613 847 Gene3D - 410 501 IPR036388 -
Mibi05g2613 847 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 424 IPR027417 -
Mibi05g2613 847 Pfam Leucine rich repeat 571 627 IPR001611 GO:0005515
Mibi05g2613 847 Coils Coil 61 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2613 Mibi-ChrMibi05 50350203 50352746 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2613 187 658 WRKY Transcription Factor Family AT5G45050 23.301 2.06e-11 66.2