Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2573 ATGGGTTATATGTGTGATTTCTGTGGAGAACAGAGGTCCATGGTATATTGCCGGTCCGACGCTGCATGCTTGTGTTTGTCGTGTGACCGAAATGTTCATTCTGCTAATGCACTTTCAAGACGTCATTCAAGGAACTTACTATGTGAGAGATGCAATTCTCAACCTGCCCTTGTAAGGTGTACTGAAGATAGGATTTCACTATGTCAGAACTGTGATTGGGTTGGCCACAGTGCTTCCACATCTTTGTCAACACATAAAAGGCAAACAATCAATTCCTATTCAGGATGCCCTTCAGCTGCAGAACTTTCTTCAATATGGTCATTTGTCTTGGATATTCCATCTATTGGTGAATCTTCGTGTGAGCAAGAACTAGGTATGATGAGTATTAATGAGAATAACAACAGGAGTGATTGGGTCCCCTCTGAAAGTCAGGATGCATCCGCACCAGCTCAAGTGATTGATATACGCAGCATGGATAATTCTTGTGCCAGGCCATCTTCAATGCCTGAGTCAAGCTCAGAGCCTCGTTCTCTAGACTGCCCAACTGGACCTGCCAATGAAAGTCTATCCAAGTTATACTGTCCCGGTACTAAAGAGTCAGAACTATATGAAGATGATGATAACCTATATGGTGACTTTGACATGGATGAAGTGGATCTGAATCTTGAGAACTATGAGGAGCTTTTTGGTGTGGCTCTCAGTCATTCTGAAGAGCTTTTTGAAAATGGTGGGATTGATAGTTTGTTTGGGACAAAAGAAATGTCTGCCGGTGATTCCAATCGTCAGGCTGCTGCTGAGGGTTCCTCAATTGGACTTCTCAACACAGCGCATCCGGCATGCAGCAATGCAGCATCTGCAGATTCCATGCTAAGTACAAAAACTGAACCAATTCTCTGTTTTACTGGAAAGCAAGCGCAATCAAACCTTTCCTTTTCTGGAGTTACTGGAGAGAGTGGTGGTGCTGACTATCAAGATTGTGGTGCTTCTTCAATGCTTCCCACTGGGGAGCCTCCGTGGTGCCCTCCATGCCCTGAAAGTTCTGTCAAAACTTCCAACCGCAGTGATGCCGTAATGCGTTACAAAGAAAAGAAGAAGTCACGCAAGTTTGATAAAAGAGTAAGGTATGCTTCTCGCAAGGCAAGGGCTGATGTTCGAAGGCGTGTGAAGGGCCGGTTTGTTAAAGCCGGTGAAGCTTATGATTATGATCCTTTGAGTCAAACCAGAAGCTGCTGA 1233 0.4461 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRNLLCERCNSQPALVRCTEDRISLCQNCDWVGHSASTSLSTHKRQTINSYSGCPSAAELSSIWSFVLDIPSIGESSCEQELGMMSINENNNRSDWVPSESQDASAPAQVIDIRSMDNSCARPSSMPESSSEPRSLDCPTGPANESLSKLYCPGTKESELYEDDDNLYGDFDMDEVDLNLENYEELFGVALSHSEELFENGGIDSLFGTKEMSAGDSNRQAAAEGSSIGLLNTAHPACSNAASADSMLSTKTEPILCFTGKQAQSNLSFSGVTGESGGADYQDCGASSMLPTGEPPWCPPCPESSVKTSNRSDAVMRYKEKKKSRKFDKRVRYASRKARADVRRRVKGRFVKAGEAYDYDPLSQTRSC 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2573 410 MobiDBLite consensus disorder prediction 343 376 - -
Mibi05g2573 410 MobiDBLite consensus disorder prediction 159 184 - -
Mibi05g2573 410 CDD Bbox1_BBX-like 5 44 - -
Mibi05g2573 410 SMART bboxneu5 4 47 IPR000315 GO:0008270
Mibi05g2573 410 SMART bboxneu5 48 90 IPR000315 GO:0008270
Mibi05g2573 410 ProSiteProfiles CCT domain profile. 353 395 IPR010402 GO:0005515
Mibi05g2573 410 Pfam CCT motif 353 395 IPR010402 GO:0005515
Mibi05g2573 410 Pfam B-box zinc finger 44 89 IPR000315 GO:0008270
Mibi05g2573 410 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Mibi05g2573 410 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 398 - -
Mibi05g2573 410 MobiDBLite consensus disorder prediction 160 179 - -
Mibi05g2573 410 CDD Bbox1_BBX-like 47 90 - -
Mibi05g2573 410 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2573 Mibi-ChrMibi05 49294039 49297786 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2573 1 409 C2C2-CO-like Transcription Factor Family AT5G48250 56.938 5.57e-155 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mibi05g2573 zf-B_box 7.3e-06 No_clan