Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2552 ATGGCCAAAAGCCATGATCATTATTCAGATTCACTAAGATGGGGGGAGGCAGCAGAATTGCTCAAGGGAAGCCACTTGGACGAAGTGAGAGCCATGGCGGCGGACTACCGGAGGGCCGCCGTCCATCTAGGCGGCGCGTGGCTGTCGGTTTCTCATGTGGCGGCGGTGGCTAACCGGAGCTCCGGCGATGTGAAGGTGGCGCTATCGGAGACGGCGAGGGCCGCCGTGAAGGCGAGCAGTGATTGGATAATGGAAAATGTTAAGAGTGGAACTCCCATTTATGGTGTCACCACTGGCTTTGGTGCTGCTTCTCATAAGCGAACGGACCAAGTTGCTGCTCTTCAGAAGGAGCTTGTGAGATTCTTAAACTGTGCAATATTCGACAAGGGAAAAGATATAAATCACACTCTGCCCCGGGCAGCAAGCAGAGCAGCCATGCTTGTGAGAGTGAACACTCTGCTTCAAGGCTATTCAGGCATTAGATTTGAGATGTTAGAAGCTATCACCAAACTTCTCAACAACAATGTCACTCCTTGCTTGCCTCTCCGTGGCACCGTTACCGCCTCTGGTGATCTCATCCCTCTTTCCTACATTCTTGCATTGCTTGTTGGTCGCCCAAATTCACAAGCCATTGGACCTAATGGAGAATTCCTTACTCCCAAACAAGCTTTTCTCCTAGCCGGCATCAATACCCACCACAATACTACAGGGGCCGATACCAGTAAATTATTAGATGATGAGGTAGAAACAGAAAATGGTGGGTCCAACGTGGATAGTGTCAAGTTCTTTGAATTGCAGCCAAAGGAAGGCCTTGCTCTTGTGAATGGCACAGCCGTTGGGTCTGGATTGGCTTCAGTGGTGCTTTTTGAAGCAAACATTTTAGTTTTACTATCGGAAGTCACATCTGCCATTTTTGCTGAAGTAATGCATGCCAAACCAGAATTCACTCATCACATGATTCACAATCTCAAGCATCATCCTGGTCAAATTGAAGCAGCTGCAATTATGGAACACATTTTAGAAGGTAGTTCTTATGTGAAGCATCAATGTCTAAAATCACAAAAGCCAAAGAAAGAACGATATGCTCTTATAACTTCTCCTCAATGGCTTGGACCACAAATTGAAATCATAAGGTTTTCCACAAAGTCCATTGAGAGAGAGATAAACTCTGTAAACGACAATCCTTTGATTGACGTTTCAAGTAACAAGGCTTTCCATGGTGGTAATTTCCAAGGCACACCCATTGGAGTTTCAATGGATAACACACGTTTAGCTTTGGCTTCCATTGGAAAACTTGTGTTTGCGCAGTTCACTGAGCTAGTAAACGACATGTATAACAATGGATTGCCTTCAAATCTATCCGCTTCTAGAAACCCGAGCTTGGATTATGGCTTTAAGGCTTGTGAAGTTGCAATGGCTTCTTATTGTTCTGAACTTCAATTTTTGGCAAATCCTGTGACTAGTCACGTGCAAAGTGCAGAACATCACAACCAAGATGTGAATTCTCTGGGTTTGATTTCTGCAAGAAAAAGTAGTGAGGCTATTGAGATTTTGCAGCTCATGTGCTCAACTTATTTAGCTGCACTATGTCAAGCCATTGATCTGAGGCACCTGGAAGAAATCTTCATTATCACAGTGAAAAGCACTGTAAGCCAAATCACAAACAAGATATTTCAGTCCACAACAGAAAACTCATTTCCTGTTTGTGAAGAAGATTTACTCAAAGTGATTGATAATGAGTATGTGTTTTCCTATATTGATGATCCATTCAATGCTGGATACCCATTTATGCCAAAACTCAAACAAATTCTTTATGAGACAGCACACAAGAATGCTGTGAAAGAGAGGAAGACTAATGATCATGTGGACAATGCTTCAGTTTTTGAGAAGATTGAAGATTTTGAAAATGAACTTAAGCTTGTTTTGCCGAAGGAAATTGAAAAGGCAAGAGTGGATTATGAGAATGGTGAGTCAGCAATTCCAAATAGGATTAAGGAGTGTAAGTCTTATCCATTATACAAGTTTATGAGGGAAGAGTTAAAGACTGGGTTACTTACAGGAGAAAAGATCAAGTCACCAGATGAGGACTTTTATAAAGTGTTTAGAGCAATTAGTGAATCAAGGATTGTTGATCCACTTTTGGAGTGCCTTGCAGATTGGAAAGGAGTTCCAATTTCAATGTAA 2184 0.4267 MAKSHDHYSDSLRWGEAAELLKGSHLDEVRAMAADYRRAAVHLGGAWLSVSHVAAVANRSSGDVKVALSETARAAVKASSDWIMENVKSGTPIYGVTTGFGAASHKRTDQVAALQKELVRFLNCAIFDKGKDINHTLPRAASRAAMLVRVNTLLQGYSGIRFEMLEAITKLLNNNVTPCLPLRGTVTASGDLIPLSYILALLVGRPNSQAIGPNGEFLTPKQAFLLAGINTHHNTTGADTSKLLDDEVETENGGSNVDSVKFFELQPKEGLALVNGTAVGSGLASVVLFEANILVLLSEVTSAIFAEVMHAKPEFTHHMIHNLKHHPGQIEAAAIMEHILEGSSYVKHQCLKSQKPKKERYALITSPQWLGPQIEIIRFSTKSIEREINSVNDNPLIDVSSNKAFHGGNFQGTPIGVSMDNTRLALASIGKLVFAQFTELVNDMYNNGLPSNLSASRNPSLDYGFKACEVAMASYCSELQFLANPVTSHVQSAEHHNQDVNSLGLISARKSSEAIEILQLMCSTYLAALCQAIDLRHLEEIFIITVKSTVSQITNKIFQSTTENSFPVCEEDLLKVIDNEYVFSYIDDPFNAGYPFMPKLKQILYETAHKNAVKERKTNDHVDNASVFEKIEDFENELKLVLPKEIEKARVDYENGESAIPNRIKECKSYPLYKFMREELKTGLLTGEKIKSPDEDFYKVFRAISESRIVDPLLECLADWKGVPISM 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2552 727 Pfam Aromatic amino acid lyase 48 538 IPR001106 -
Mibi05g2552 727 PANTHER HISTIDINE AMMONIA-LYASE 261 726 IPR001106 -
Mibi05g2552 727 SUPERFAMILY L-aspartase-like 10 725 IPR008948 GO:0003824
Mibi05g2552 727 FunFam Phenylalanine ammonia-lyase 1 238 - -
Mibi05g2552 727 Gene3D - 539 662 IPR023144 -
Mibi05g2552 727 Gene3D Fumarase/aspartase (Central domain) 278 722 - -
Mibi05g2552 727 Gene3D - 2 277 IPR024083 -
Mibi05g2552 727 CDD PAL-HAL 48 536 IPR001106 -
Mibi05g2552 727 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 184 200 IPR022313 GO:0016841
Mibi05g2552 727 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 260 717 IPR005922 GO:0005737|GO:0006559|GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2552 Mibi-ChrMibi05 48808122 48812179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2552 10 727 Monolignol Biosynthesis Gene Families AT2G37040 64.601 0.0 966