Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2550 ATGCAGCAGCTTCTGAGTATGGGCTTCCCAGATGAGTTAGCAGCCGAAGCCTTAGCTGCTACTGGTGGCAAATCCACCATTAAAGCCACCGAATGGATCTTAAGCCACAAACCCACTTCTTCTAACAATGCTTCTAACTCATCAAACCCTTCTCCAGTTCAGCCTAAACTCGATCGCTTCTTCAACTTTCAATCCAAACCCTCTTCCACTACAGTCACTGCCTCATCATCACAAGCAATTCAACAAGAGGAACAACAAAATGCAGATTTAGATTCACAAGAATCAACCCCAAATGCCAATCCTCCATCCAAACGTCTCAAACTTTCACCCCCCAACGCCAAACCCACTTCTAATTCCAAGCCCCATGAGCCCTTATATGAGCGAATGCGTCCCAAAACCATTGATGATGTCATTGGTCAAGACCATTTGGTTGCTTCTAATTCGCTCCTTAGATCAGCTATTGAACGTGGTCGTCTTCCTTCAATAATCTTCTGGGGTCCACCGGGTACAGGTAAGACATCTATTGCTAAAGCCATTGTTAATTCAGCAAGTTCTTGTCAGAAACAAAAATGTCCTTTTTATCGCTTTGTTTCGTTATCTGCTGTGTCTAGTGGTGTTAAAGATGTGAGGGATGCGGTTGATGAGGCTAGGAAATTGAGAGTTAAGTGTAATCAAAGGACTGTTCTTTTTGTGGATGAGGTTCACAGGTTTAACAAGTCTCAACAGGATTCTTTTTTGCCTGTTATTGAGGATGGAAGTATTGTATTTGTTGGTGCCACTACTGAAAACCCTTCCTTCCATTTGATTACACCATTGTTGTCTCGGTGTCGTGTGCTTACCCTTAACCCCTTGAAACCCCACCATGTTGAGATGATTCTAAAGAGGGCTGTGAGTAATGTTGACAAAGGATTGGTTCAAAGCATTGGCTTTCAAGTTGATGTAGGTGAAGATGTAGTTAGTTTTATAGCCAACAATTGTGATGGTGATGCTCGAGTGGCATTGAATGCGTTGGAGATTGCGGCTGTTACGGCCGCAGCTCGGTCACAAGATCATAAGGGATCTAAGGATGTCAGAGAAATGGAAGGCTTGGATGTTCAAATAAATGAAGAAAATAGAGCTGATCCATCTCTTAGTGTTGTTACCCTGGAAGATGCAAAAGAGGCACTTCAGTGCAAGCACCTTGCTTATGATAAAGCTGGGGAAGAGCACTATAATCTAATTAGTGCTCTGCACAAATCAATGAGGGGAAGTGATGCTAATGCGGCGATATATTGGTTGGCTAGAATGTTGGAAGGAGGTGAAGAGCCTCTTTACATTGCACGGAGGTTGATAAGGTTTGCAAGTGAGGACGTTGGATTGGCTTGTCCGACCGCTCTCAATCAGGCTGTTTCGTGTTATCAAGCCTGCCACTTCTTGGGTATGCCTGAGTGTAACGTGATTCTTGCGCAGTGTGTTGCTTATTTGGCCCTGTCTCCTAAATCAGTTGCTGTATATGGAGCAATAGAAGCTGCTCAGAAGGTCGTCAAGGAATCGATTGGACAGAATGAGGGAGTGCCTCTCCATCTAAGAAATGCACCAACTAAATTAATGAAGGAACTTGGTTACGGGAAGGGATACATATACACTCCTGATCAGCCCACTTTGACCCAGAGCTATTTACCCCCCTCACTAAATGGGTACAAGTTCCTTGATTGGCCTGAAAGTAATACCTCTGACGGATAA 1722 0.4396 MQQLLSMGFPDELAAEALAATGGKSTIKATEWILSHKPTSSNNASNSSNPSPVQPKLDRFFNFQSKPSSTTVTASSSQAIQQEEQQNADLDSQESTPNANPPSKRLKLSPPNAKPTSNSKPHEPLYERMRPKTIDDVIGQDHLVASNSLLRSAIERGRLPSIIFWGPPGTGKTSIAKAIVNSASSCQKQKCPFYRFVSLSAVSSGVKDVRDAVDEARKLRVKCNQRTVLFVDEVHRFNKSQQDSFLPVIEDGSIVFVGATTENPSFHLITPLLSRCRVLTLNPLKPHHVEMILKRAVSNVDKGLVQSIGFQVDVGEDVVSFIANNCDGDARVALNALEIAAVTAAARSQDHKGSKDVREMEGLDVQINEENRADPSLSVVTLEDAKEALQCKHLAYDKAGEEHYNLISALHKSMRGSDANAAIYWLARMLEGGEEPLYIARRLIRFASEDVGLACPTALNQAVSCYQACHFLGMPECNVILAQCVAYLALSPKSVAVYGAIEAAQKVVKESIGQNEGVPLHLRNAPTKLMKELGYGKGYIYTPDQPTLTQSYLPPSLNGYKFLDWPESNTSDG 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2550 573 Gene3D - 494 571 - -
Mibi05g2550 573 CDD AAA 138 277 - -
Mibi05g2550 573 Gene3D - 1 51 - -
Mibi05g2550 573 FunFam Replication-associated recombination protein A 116 283 - -
Mibi05g2550 573 Gene3D - 284 358 - -
Mibi05g2550 573 MobiDBLite consensus disorder prediction 31 128 - -
Mibi05g2550 573 MobiDBLite consensus disorder prediction 61 119 - -
Mibi05g2550 573 MobiDBLite consensus disorder prediction 32 55 - -
Mibi05g2550 573 PANTHER WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER 2 570 - -
Mibi05g2550 573 Gene3D - 113 282 IPR027417 -
Mibi05g2550 573 SUPERFAMILY UBA-like 1 39 IPR009060 GO:0005515
Mibi05g2550 573 Pfam MgsA AAA+ ATPase C terminal 416 564 IPR021886 -
Mibi05g2550 573 Gene3D - 390 493 - -
Mibi05g2550 573 FunFam Putative AAA family ATPase 390 493 - -
Mibi05g2550 573 Pfam ATPase family associated with various cellular activities (AAA) 162 278 IPR003959 GO:0005524|GO:0016887
Mibi05g2550 573 Pfam AAA C-terminal domain 311 415 IPR032423 -
Mibi05g2550 573 CDD HLD_clamp_RarA 284 359 - -
Mibi05g2550 573 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 356 IPR027417 -
Mibi05g2550 573 Pfam UBA/TS-N domain 2 33 IPR015940 -
Mibi05g2550 573 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 1 36 IPR015940 -
Mibi05g2550 573 SUPERFAMILY post-AAA+ oligomerization domain-like 400 566 IPR008921 GO:0003677|GO:0006260
Mibi05g2550 573 SMART AAA_5 158 284 IPR003593 -
Mibi05g2550 573 FunFam AAA-type ATPase family protein 284 358 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2550 110 371 Core DNA Replication Machinery Family AT1G77470 27.612 1.36e-11 64.7