Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2547 ATGGACCAATGCAATGGCAATGCGCGCAATTCAACTTCAAAGAAAACCTCGTTGCCGCCAAGAATTCCATCACTCTGTCCAACGGTCGAATCCAATCACTCTATAACGTCACTCTCTCTCTTTGTCTTTGCCGCCAAACTCTTCGTCTTTCCTCAATTCTCTCTCTCTCTCTCTCTCTCTGCGATTACCCTTTTCTCTCGCTTTCTGAACCCTAAATTTGTTAGCGGCGATCTTTATCAGCAATCGGTTCGAATTCGTGCGAATACTTCGGGCATACTGTTCGTGCCTTCTCCGCTTTCTATAGTATTCTGGGTATTTTTTTGCACTTGTTACCCAGTGACAATGGATACAACTATACCACATGGCTTCAAGTTTAACCCTACAGATCAAGAACTTATTTGGCATTACTTGTACAAGAAGGCTAATGGCAAACCCCTCCCTTGTAATGCAATTATTGATTGTGACATTTATGGAGATGACGGTTCTTGGAGGAAGATGTTTGAGGAAAGGGAAGAGGAATCTCTTCACTTCTTCACCAGATTAAGAAATTTGAGCACCCAAAAAAATGGTTCTTCTTCAAGGGTTGGGAGAGCCACAGAGTTTGGTACTTGGAAGTGTCAATCTGACATGAAAATTTATGCTGGGAAAAAGCATATCGGGTCTAAGAGGGCCTTCTCCTTCATAAAGAAGAAGAAGGAAGAAGAAGAGAACGTGAAAAAAGGATCCAAGAAGACAAATGGTTGGACAATGCATGAGTACAGACTTGATGGTTGTCTTCTGCCTCAAAAGGAACAAAATTCTTCAGATTATGGGTATGTGGTCTCCAGGATCAGCAGGCCAAGACACATGAGGAGAGACGAAGGAGAATCAGTCAGCTCTCAAATCGAGTGTGAACAGGATGCTCTATTTCTCGATGAGCTACTGCAAGGCAACAACAAATCTGAGAATGTGGAGATGCTTCCTGATTATAATCTTGAGTTAGATATGAGTTATGATTGGTTATCATATTTTCTTGAAGACGAGGATCCAGATAAGTTTGCCTTTCTTTCATATTGA 1056 0.4176 MDQCNGNARNSTSKKTSLPPRIPSLCPTVESNHSITSLSLFVFAAKLFVFPQFSLSLSLSAITLFSRFLNPKFVSGDLYQQSVRIRANTSGILFVPSPLSIVFWVFFCTCYPVTMDTTIPHGFKFNPTDQELIWHYLYKKANGKPLPCNAIIDCDIYGDDGSWRKMFEEREEESLHFFTRLRNLSTQKNGSSSRVGRATEFGTWKCQSDMKIYAGKKHIGSKRAFSFIKKKKEEEENVKKGSKKTNGWTMHEYRLDGCLLPQKEQNSSDYGYVVSRISRPRHMRRDEGESVSSQIECEQDALFLDELLQGNNKSENVEMLPDYNLELDMSYDWLSYFLEDEDPDKFAFLSY 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2547 351 PANTHER NAC TRANSCRIPTION FACTOR 56 119 293 - -
Mibi05g2547 351 Pfam No apical meristem (NAM) protein 120 255 IPR003441 GO:0003677|GO:0006355
Mibi05g2547 351 Gene3D NAC domain 128 283 IPR036093 GO:0003677|GO:0006355
Mibi05g2547 351 SUPERFAMILY NAC domain 110 277 IPR036093 GO:0003677|GO:0006355
Mibi05g2547 351 ProSiteProfiles NAC domain profile. 119 280 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2547 Mibi-ChrMibi05 48663360 48664792 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2547 117 282 NAC Transcription Factor Family AT3G04070 35.359 1.85e-18 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi05g2547 NAM 5.4e-22 No_clan