Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2544 ATGGATACAACTATACCGCACGGCTTCAAGTTTAACCCTACAGATCAAGAACTTATTTGGCATTACTTGTACAAGAAGGCTAATGGCAAACCTCTCCCTTGTAATGCAATTATTGATTGTGACATTTATGGAGGTGACTGCTCTTGGAGGAAGATGTTTGAGGAAAGGGAAGAGGAATCTCTTCACTTCTTCACCAGATTAAGAAACTTGGGCACCCAAAAAAATGGTTCTTCTTCAAGGGTTGGGAGAGCCACAGAGTTTGGTACTTGGAAGTGTCAATCTGACATGAAAATTTATGCTGGGAAAAAGCATATCGGGTCTAAGAGGGCCTTCTCCTTCATAGAGAAGAAGAAGGAAGAAGAAGAGCCCCTGAAAAAAGGATCCAAGAAGACAAATGGTTGGACAATGCATGAGTACAGACTTGATGGTTGTCTTCTGCCTCAAAAGGAACAAAATTCTTCAGATTATGGGTATGTGGTCTCCAGGATCAGCAGGCCTAGACACATGAGGAGAGATGAAGGAGAATCAATCAGCTCTCAAATCGAGTGTGAACAGGATGCTCTATTTCTTGATGAGCTGCTGCAAGACAACAACAAATTTGAGAATGTTGAAATGCTTCCTGATTATAATCTTGAGCTTTCTATTCATGGAATTCTGTGTAGGGTATACTGTCGTCTTGTGAAGAATTTGAAACACTATTTCTGTGCTAACATTTCATTGACTGGTGATGTTGTTCTTGCTGCTGCATATGCGCATGAGTTGTCAGGCTATGGTCTCATAGTTGTCCTACAAACTACACTGCAAGTGCAGCTTAGAAAAGGTCTCGAACAGGATGTTCTATTTCCTGATGAGCTACTGCAAGATAACAACAAATTTGAGAATGTTGAGATACTTCCTGATTATAACCTTGAGGTAGATATAGATTATGATTCGTTATCATATTTTCTTGAAGACAAGGATTCGGATAAGTTTTCCTTTATTTTAGAATATATTCCGGAAGCTTAA 1005 0.396 MDTTIPHGFKFNPTDQELIWHYLYKKANGKPLPCNAIIDCDIYGGDCSWRKMFEEREEESLHFFTRLRNLGTQKNGSSSRVGRATEFGTWKCQSDMKIYAGKKHIGSKRAFSFIEKKKEEEEPLKKGSKKTNGWTMHEYRLDGCLLPQKEQNSSDYGYVVSRISRPRHMRRDEGESISSQIECEQDALFLDELLQDNNKFENVEMLPDYNLELSIHGILCRVYCRLVKNLKHYFCANISLTGDVVLAAAYAHELSGYGLIVVLQTTLQVQLRKGLEQDVLFPDELLQDNNKFENVEILPDYNLEVDIDYDSLSYFLEDKDSDKFSFILEYIPEA 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2544 334 Pfam No apical meristem (NAM) protein 6 141 IPR003441 GO:0003677|GO:0006355
Mibi05g2544 334 PANTHER NAC TRANSCRIPTION FACTOR 56 5 179 - -
Mibi05g2544 334 SUPERFAMILY NAC domain 4 163 IPR036093 GO:0003677|GO:0006355
Mibi05g2544 334 Gene3D NAC domain 14 169 IPR036093 GO:0003677|GO:0006355
Mibi05g2544 334 ProSiteProfiles NAC domain profile. 5 166 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2544 Mibi-ChrMibi05 48651755 48653378 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2544 3 168 NAC Transcription Factor Family AT3G04070 35.359 1.05e-18 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi05g2544 NAM 1.4e-21 No_clan