Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2541 ATGGGACGTTCTCGCGTCGCTTCGCGCCAACCTGACGATGACCCCACCCTTAGATCCAAGAGGAAAAAGGTAGCTCTGAATGCAGAGAATTCAGAAATTTTAAGTATAGGCCATGGAATAAATGAGGGGAAAGCATCTCTTTACCACTGTAATTACTGCAACAAAGATATTTCCAGGAAGATCCGCATAAAGTGTGCTGTTTGTCAAGATTTTGATCTCTGCATAGAGTGCTTCTCTGTTGGAGCTGAGGTGACACCTCACAAAAGCAATCATCCATATAGGGTTATGGATAATCTATCTTTTCCATTGCTATGTCCAGAATGGAATGCAGATGATGAGATGCTGCTTCTAGATGGCCTTGGAATGTATGGATTTGGAAACTGGGCTGAAGTAGCGAGATGTGTTGGAACAAAAATCAAGTCTGAATGTATTGACCACTATAATGCTTTTTACATGAACTCACCATGTTTTCCTCTCCCTGATATGTCTCGTGTTATGGGAAAGAGCAGAGAGGAGCTCATTGCCATGGCCAAAGAGTATGGTGATGTTAAGAAAGAACTTTCTCCAAATGCAGAGCTTACATTGAAAGAAGAGCCACACTTTTCTGCAGGAATAAACTCAGAGGAATCTAAAAAGGAGGAATCTGCTAATCAAACATTGTCTAGCTTAACATCAGGTGCTGATACGGGCACAGTTCCTGCCAAAGCTTATTCAAGTTCATGTAAGAAGGCTTCCCATGCTAAGCACATTAACAACATACATAAGATGGAAGTGGAGTCTCAAGCAGATCGAAGCATTGGAGAGAAAAAACCCAAGTTATCTGGGGGAGATGGGCCTTCTGTTATGGAGTTAAGTGGATACAATTTTAAGAGAGAAGAATTTGAGATTGAATATGACAATGATGCAGAACATGTATTAGCAGATATGGAATTTAAGGACACTGATACCGAATCTGAACGTTCATTGAAATTACAGGTTCTCCAAATATACTCAAAAAGGTTAGATGAACGAAAGAGGAGAAAGAATTTTATCCTTGAAAGAAATTTGCTTTATGCTGACCCCTTTGAGAAATCTCTTACACCTGAGGAGATACAAATATGTAAGCGCCATAGGGTCTTCACACGGTTTCACTCTAAAGAAGAGCACACGGAGTTTCTTAAAACGATTATTGAAGAACATCGTTTAGTTAAGAGAATACAAGATCTCCAGGAAGCTCGAGCTGCTGGTTGTCGACTGTCTGCCAATGCGTATAGATTTATTGATCTCAAGAGGGCAAAGGATGCTGAACAAAGTGCCAATAATGAAAACGCCAGGGATTCACCTGCCGCACGACAGGCATTCATAAGGTCTCTAGATGATTGGGACGTCTCTGGAATTATGGGTGCTGAGTTACTATCAGAATCCGAGAAAGAGCTGTGTGATGAGATTAGAGTTCTACCGTCACACTATCTTAACATGTTGCAGATCATGACGGATGAAATTTCTAAGGGTAGTATGACCAAGAAATCTGATGCATATGTCTTGTTTAATGTAGAACCGAGCAAGGTTGATAGAGTTTATGATATGCTTGTGAAAAAGGGGATTGCTTCAACTTGA 1596 0.4073 MGRSRVASRQPDDDPTLRSKRKKVALNAENSEILSIGHGINEGKASLYHCNYCNKDISRKIRIKCAVCQDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLLCPEWNADDEMLLLDGLGMYGFGNWAEVARCVGTKIKSECIDHYNAFYMNSPCFPLPDMSRVMGKSREELIAMAKEYGDVKKELSPNAELTLKEEPHFSAGINSEESKKEESANQTLSSLTSGADTGTVPAKAYSSSCKKASHAKHINNIHKMEVESQADRSIGEKKPKLSGGDGPSVMELSGYNFKREEFEIEYDNDAEHVLADMEFKDTDTESERSLKLQVLQIYSKRLDERKRRKNFILERNLLYADPFEKSLTPEEIQICKRHRVFTRFHSKEEHTEFLKTIIEEHRLVKRIQDLQEARAAGCRLSANAYRFIDLKRAKDAEQSANNENARDSPAARQAFIRSLDDWDVSGIMGAELLSESEKELCDEIRVLPSHYLNMLQIMTDEISKGSMTKKSDAYVLFNVEPSKVDRVYDMLVKKGIAST 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2541 531 MobiDBLite consensus disorder prediction 216 234 - -
Mibi05g2541 531 Gene3D - 447 530 IPR036388 -
Mibi05g2541 531 ProSiteProfiles SANT domain profile. 103 155 IPR017884 -
Mibi05g2541 531 FunFam Transcriptional adapter 2 448 530 - -
Mibi05g2541 531 Gene3D - 103 153 - -
Mibi05g2541 531 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 47 526 - -
Mibi05g2541 531 SUPERFAMILY Homeodomain-like 101 154 IPR009057 -
Mibi05g2541 531 MobiDBLite consensus disorder prediction 191 234 - -
Mibi05g2541 531 Pfam Zinc finger, ZZ type 48 88 IPR000433 GO:0008270
Mibi05g2541 531 CDD ZZ_ADA2 48 96 IPR041983 -
Mibi05g2541 531 CDD SANT 107 148 IPR001005 -
Mibi05g2541 531 ProSiteProfiles Zinc finger ZZ-type profile. 45 101 IPR000433 GO:0008270
Mibi05g2541 531 ProSiteProfiles SWIRM domain profile. 445 531 IPR007526 GO:0005515
Mibi05g2541 531 Pfam Myb-like DNA-binding domain 107 148 IPR001005 -
Mibi05g2541 531 SUPERFAMILY RING/U-box 48 110 - -
Mibi05g2541 531 SMART sant 104 153 IPR001005 -
Mibi05g2541 531 ProSiteProfiles Myb-like domain profile. 108 151 IPR001005 -
Mibi05g2541 531 SUPERFAMILY Homeodomain-like 448 528 IPR009057 -
Mibi05g2541 531 MobiDBLite consensus disorder prediction 258 279 - -
Mibi05g2541 531 Gene3D - 43 96 IPR043145 -
Mibi05g2541 531 SMART zz_5 44 89 IPR000433 GO:0008270
Mibi05g2541 531 PIRSF Txn_adaptor_ADA2 37 446 IPR016827 GO:0003713|GO:0006357|GO:0035065
Mibi05g2541 531 PIRSF Txn_adaptor_ADA2 427 531 IPR016827 GO:0003713|GO:0006357|GO:0035065
Mibi05g2541 531 ProSitePatterns Zinc finger ZZ-type signature. 50 77 IPR000433 GO:0008270
Mibi05g2541 531 FunFam Transcriptional adapter 41 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2541 Mibi-ChrMibi05 48406941 48420221 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2541 1 531 EF-hand Containing Proteins AT3G07740 51.839 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi05g2541 Myb_DNA-binding 1.4e-07 CL0123