Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2520 ATGCAGGTTTGTTCTACATGGCGAGCCATTTCGCGCTCGGATCACCTATGGCAACGGCTCACCAGATGCATCTGGCGTCAAACCCACAGAACACACGACACGTGGCATGACGAGTTCATCTTCTGGCATCGAACGGCCAGAAACTTCGTCACAGGAAGATACGCCTACTCCTCCCTACAGTATAACCCAAGTCCACCGAACTTTTGCCGTTGTCTCACTATCTCCGACAACCACCTTGCTTGCGGATTCACCGATGGCACAGTCCGCTTATTCGACCTCCAAACACTCGTCCACGTCATCACCTTCCGGTCCCACCATGATGACGTGTTAGGCCTTTTCTCAAGATCAGTTTCTGGAATAATCATCACAAACTCCACCCTAGTCTTCGCCACACTAGACGGAAACATCTACGTGGCAGACATAAACGGGCCACCCGAAACCCACATAACCCGACCTGGAAACATTCTAAACGATGGCGTTTTGGTGGAGTTCGCAGGAACTGGGCAATGGTGGGTGGCACTATTTGCTGGTGTGCCTAATCGAGCGTTACGTGTATGGGACGCGCGCAACGAGCAACCCGATTATGTTGGCGGGTCCTTGACCGATCCGGATTCCGTACAAGGCTGGAGGATGCTGACTGATATAACAGAACCGGTTGGTCGCTTGCGGGTCACCACGCGCGAACTGGGCGTGGCATGCACGCGCTCGAGGCTTGTGGTTTTCGACTTGAGGAACCCTGGGGTGTTATTGCGTGAGATGATCTCCAGAGTTGGCTTCACTGTGACCTCGATGGACGTGAGCCACGAGGCGTTTGTTATCGTGGAGAGGAGGGGTCGTGCTAGGGTGCGCCGGGCGAGCACGTTAGAGTCTCAGTGTGAAGAATTTATGGTGCCGGCGCCGTCCCTTAGGGGCATGATTGGGTGCATGAACTTGGGGTATGTGCTAGTATGCGCCGGTGGTTATGTGAGATTATGGGACGTAGAACTTGGAGAGGCACAACTTCGTTTGACCATGAACGAAAGGGTGGGATTGGGTATGGCGATGGCTGCCAGCGACAGACACGTGGCGGTATCATGTAGAGACACGTCAATCCACCTCTGGGATTTTGGTGTACAATAG 1119 0.538 MQVCSTWRAISRSDHLWQRLTRCIWRQTHRTHDTWHDEFIFWHRTARNFVTGRYAYSSLQYNPSPPNFCRCLTISDNHLACGFTDGTVRLFDLQTLVHVITFRSHHDDVLGLFSRSVSGIIITNSTLVFATLDGNIYVADINGPPETHITRPGNILNDGVLVEFAGTGQWWVALFAGVPNRALRVWDARNEQPDYVGGSLTDPDSVQGWRMLTDITEPVGRLRVTTRELGVACTRSRLVVFDLRNPGVLLREMISRVGFTVTSMDVSHEAFVIVERRGRARVRRASTLESQCEEFMVPAPSLRGMIGCMNLGYVLVCAGGYVRLWDVELGEAQLRLTMNERVGLGMAMAASDRHVAVSCRDTSIHLWDFGVQ 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2520 372 PANTHER WD40 REPEAT PROTEIN 12, 37 4 290 - -
Mibi05g2520 372 SMART WD40_4 95 140 IPR001680 GO:0005515
Mibi05g2520 372 SMART WD40_4 55 92 IPR001680 GO:0005515
Mibi05g2520 372 SMART WD40_4 331 368 IPR001680 GO:0005515
Mibi05g2520 372 Gene3D - 229 371 IPR015943 GO:0005515
Mibi05g2520 372 SUPERFAMILY F-box domain 2 49 IPR036047 GO:0005515
Mibi05g2520 372 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 60 369 IPR011047 -
Mibi05g2520 372 Gene3D - 48 205 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2520 Mibi-ChrMibi05 47586566 47587684 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Mibi05g2520 None None None