Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2515 ATGTTAACGTTGTTGCTTGTTTATGAAATGTTTCGTATTCAATGGTCTACCTCATCATTTCAATTTTCAAGACCATATATCTCCGGGTCCGTGGTTTCAACGCAGCTTAGGTACAACTCAACAGAGAGAAAAGAAGAGCGAAATCGCGAGAACTCAATCCTTGAGAAGAAGAAGAAGATGTCGTGGCAAACCTACGTCGATGAGCACCTCATGTGCGAGATCGAAGGAAATCATCTCAGTTCTGCCGCTATCCTTGGCCAAGACGGAAGCGTTTGGGCCCAGAGCTCCACTTTCCCTCAGCTCAAGCCTGAGGAAATCACGGCTATCATGAATGACTTTGCCGAACCTGGAACGCTTGCTCCAACTGGATTATATCTTGGTGGCACTAAATATATGGTGATTCAAGGTGAATCAGGAGCAGTCATTCGTGGGAAGAAGGGTCCTGGTGGTGTTACTATCAAGAAGACCAACCAAGCCCTAATCATTGGAATTTATGATGAACCAATGGCTCCTGGACAGTGCAACATGATAGTGGAAAGGCTTGGTGATTACCTTATTGATCAGGGTCTTTAA 573 0.4503 MLTLLLVYEMFRIQWSTSSFQFSRPYISGSVVSTQLRYNSTERKEERNRENSILEKKKKMSWQTYVDEHLMCEIEGNHLSSAAILGQDGSVWAQSSTFPQLKPEEITAIMNDFAEPGTLAPTGLYLGGTKYMVIQGESGAVIRGKKGPGGVTIKKTNQALIIGIYDEPMAPGQCNMIVERLGDYLIDQGL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2515 190 PRINTS Profilin signature 99 119 IPR005455 GO:0003779
Mibi05g2515 190 PRINTS Profilin signature 62 71 IPR005455 GO:0003779
Mibi05g2515 190 PRINTS Profilin signature 123 137 IPR005455 GO:0003779
Mibi05g2515 190 PRINTS Profilin signature 159 172 IPR005455 GO:0003779
Mibi05g2515 190 PRINTS Profilin signature 80 89 IPR005455 GO:0003779
Mibi05g2515 190 PRINTS Profilin signature 172 189 IPR005455 GO:0003779
Mibi05g2515 190 SUPERFAMILY Profilin (actin-binding protein) 61 189 IPR036140 -
Mibi05g2515 190 SMART prof_2 60 190 IPR005455 GO:0003779
Mibi05g2515 190 FunFam Profilin 60 190 - -
Mibi05g2515 190 PRINTS Plant profilin signature 86 99 IPR005455 GO:0003779
Mibi05g2515 190 PRINTS Plant profilin signature 60 73 IPR005455 GO:0003779
Mibi05g2515 190 PRINTS Plant profilin signature 111 125 IPR005455 GO:0003779
Mibi05g2515 190 PRINTS Plant profilin signature 176 189 IPR005455 GO:0003779
Mibi05g2515 190 PRINTS Plant profilin signature 163 176 IPR005455 GO:0003779
Mibi05g2515 190 PRINTS Plant profilin signature 130 139 IPR005455 GO:0003779
Mibi05g2515 190 PRINTS Plant profilin signature 143 158 IPR005455 GO:0003779
Mibi05g2515 190 CDD PROF 61 189 IPR005455 GO:0003779
Mibi05g2515 190 PANTHER PROFILIN 60 189 IPR005455 GO:0003779
Mibi05g2515 190 Pfam Profilin 60 189 IPR005455 GO:0003779
Mibi05g2515 190 Gene3D Dynein light chain 2a, cytoplasmic 58 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2515 Mibi-ChrMibi05 47156791 47159726 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2515 60 190 Cytoskeleton Gene Families AT2G19760 78.626 6.53e-78 227