Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2488 ATGTGTTTTAAGGAGAAATTTTCTGATCAATGGATATATGCATACGGTAGTGTTTCACCAAAACTTGACGTATATGCTTTTGGAGTTGTCCTCTATGAACTTATATCTGCTAAAGGAGCACTGTTCAGGGCTGGTGAATCAAGTTCTGATACAAAAGGCCTTGTCTCTTTGTTTGAAGAAGCTCTTGAGAAGCGTAATCCAAAAGAACACCTTCAAAACCTTGTTGATCCGAGGCTCGGTGGCCAATACACAATAGATTCAGTTTACAAGGTGGCACAGCTAGCCAAAGTGTGCACAGATGGAGACCCAGACCGACGCCCAAGCATGCGATCTGTTGTGGTGACTTTGATGACACTTTCTTCTACTTCTGTGGACTTGGATATTATTCCCTCCTTGCATGAAAATCCAACATTCAAAAATATGTTCTCCCAAAGGTAG 438 0.4178 MCFKEKFSDQWIYAYGSVSPKLDVYAFGVVLYELISAKGALFRAGESSSDTKGLVSLFEEALEKRNPKEHLQNLVDPRLGGQYTIDSVYKVAQLAKVCTDGDPDRRPSMRSVVVTLMTLSSTSVDLDIIPSLHENPTFKNMFSQR 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2488 145 Gene3D Transferase(Phosphotransferase) domain 1 6 129 - -
Mibi05g2488 145 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 14 127 IPR044812 GO:0019199|GO:0045087
Mibi05g2488 145 SUPERFAMILY Protein kinase-like (PK-like) 15 113 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2488 Mibi-ChrMibi05 46516027 46518777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2488 15 128 Receptor kinase-like Gene Family AT3G21630 52.632 9.01e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mibi05g2488 None None None