Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2467 ATGTCCTACTCCAGAAGATCAAGCGATATGGTAATTGACGTTCACCTGGTTGTTGATCTATGGACAAGAGAGTCACGAGGGTTTGGATTTGTGACTATGGAAACTGTCAAGGATGCTGAATGTTGTGAAAAGTACCTGGATCGCTCTGTTCTTGGAGGGCGTAGGCATGCCATATTTGATGCCTTAGTAAGAAGTGTAAAGCCAACTGCACTATGGGATCTTTATGCATTTGTATGTGGACCTTCTAGGTTTACTAACTCTAGCCCAGAGGTGCACCTACTAGATGAGTATTTCCGGCTTCTTGGAAAACATACTTATAGTGCTACAGTCAACATGATTGGAAGTGAGTCCTTTACTCTGTCGAATGACTTGTGGAGAATAAGTAAAGTGAATTCTAACTACAGCATGTGCCAGAGTTATCCTTTCGCGTTGATTGTACCAAAGACCATAAGCTGA 456 0.4232 MSYSRRSSDMVIDVHLVVDLWTRESRGFGFVTMETVKDAECCEKYLDRSVLGGRRHAIFDALVRSVKPTALWDLYAFVCGPSRFTNSSPEVHLLDEYFRLLGKHTYSATVNMIGSESFTLSNDLWRISKVNSNYSMCQSYPFALIVPKTIS 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2467 151 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 55 IPR000504 GO:0003723
Mibi05g2467 151 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 11 55 - -
Mibi05g2467 151 ProSiteProfiles Myotubularin phosphatase domain. 103 151 IPR010569 -
Mibi05g2467 151 Gene3D - 8 67 IPR012677 -
Mibi05g2467 151 Pfam Myotubularin-like phosphatase domain 75 151 IPR010569 -
Mibi05g2467 151 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 119 151 IPR029021 -
Mibi05g2467 151 SUPERFAMILY RNA-binding domain, RBD 11 68 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2467 Mibi-ChrMibi05 45120022 45121684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2467 54 151 Protein tyrosine phosphatase (PTP) family AT5G04540 63.265 1.67e-40 142