Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2459 ATGGAGAAAGTCACTCACACTGATGCTGACGAGATGCCAGCTTTGCATCCACCAATTTCTGATGCGCCACACAATGCAAAGCCTGAACAGGCTTGCCCCATTAAGTATTCTATTGTCAGTAGGCGTGGGCTTGGGACTATGGGGAAGCACATGCTAGTGCTTGCCAATCATTTCCAAGTTTCTGTTGGTGCTCCAGATGCTGTGTTTTTCCAATATTGTGTTTGTATTACTTTAGAAAATGATAGAGCTGTTGAAAGCAAGGGCATTGCAAGAAAACTGATTGATAGGCTTTACCAAACCTACTCTTCTGATCTTGGTGGTAAAAGGTTTGCCTATGATGGAGGGAAAACTTTGTATACAGTGGGTCCTCTGCCACATCAAAAGCTTGAGTTCACAGTAGTACTTGAGGAATCATTGGCAAAATGTAGTAATGGTGGTCCTGGTGCTGATGGAAGCCTTAGCCTGGGAAATAAAAAGTCAAAGCATTCTTTTAAGTCAAAAGCTTTCAATGTGAAGATAAGTTTTGCTGCCAAAGTACCCCTGCAGTCCATTGCTTTGGCGTTGGAAGGAGTTGAGTCAGATTCTAATGCTCAAGATGCTTTGAGAGTGCTTGATATTATTCTGAGGCAGCAAGCAGCTAGCATGAGTTGTCTTTTGGTAAGGCAATCATTCTTTCGTGATGACTCGAGGAATTTCACTGATGTTGGAGGCGGTGTAACAGGAGTTCAAGGTTTTCATTCCAGCTTCCATCCTACAAAGGGTGGACTGTCTCTCAATATGGATGTGTCCACAACGTTGATATTAACTCCTGGACCTGTAATTGATTTTCTCCTATCCAACCAGAGTGTGAGGGAACCCCGATTTATTGACTGGGCAAAGGCCAAGCGAATGCTTAAAAATTTAAGGGTACGTGCTTCTCATCGCAGCCAAGAATATAAAATTATCAGCTTGAGTGAGAAACCATGTAATCAGCAACTTTTCAGTATGAAGGTGAAAAACGGTGAGGGCAATAATGGAGTGGAAACAGTGGATATTACTGTTCATGAGTATTTTTCTAAACACTGTGGCATAGAACTCGCTTCTGCGTATCTCCCTTGCCTTGATGTTGGGAAGCCGAAACGGCCCATCTATCTACCCATTGAGCTTTGCTCACTCATTCCCCTTCAACGTTATACAAAGGCATTATCTCCAATGCAGAGGGCTTCTTTAGTTGAAAAATCACGGCAAAAGCCGCAAGATAGAATCAAAACAATAACAGATGCTATGACAACACATCTCTATGATGATGATCCTATTCTTGCGGCATGTGGCTTTTCTATCAAGAAGCAATTTACACAAGTTGAAGGTCGTGTTCTTGAGGCTCCAAGATTGATGGTTGGAAAGAATGATGAGTGCCTTCCTTGTAATGGACGATGGAACTTTAAGAACAAGACGCTTCTTCAACCAGCTCACATTGATCTCTGGGCTGTGGTAAATTTTTCAGCTCGTTGCGACACTAGTTACCTTTCAAGGGAGCTTATCAGATGTGGAATGAACAAAGGAATTAAAATTGAACGCCCATATACTTTAATAGAAGAAGATGCACAAATTAGAAGATCTAGCCCTGTTGCTAGAGTTGAAAAGATGTTTGAGCTGCTATATGCTAAGCTTCTTGATGAACCAGACTTCATTCTTTGTGTCTTGCCTGAGAGGAAAAATTGTGACATTTATGGGCCTTGGAAGAAGAAATGTCTGACTGAAGTTGGTGTTGTTACACAGTGCATTTCACCTTTAAAGATGAATGATCAATACCTTACTAATGTACTTCTTAAAATCAATTCCAAGCTCGGTGGAATAAATTCTTTGCTAGCCATAGAGAATTCTGGGCAGATTCCCCTAATAAATGATACTCCCACTCTGATCTTAGGAATGGATGTCTCTCATGGGTCTCCTGGTCAATCAGACATTCCATCAATAGCAGCAGTTGTTGGATCTAGATGTTGGCCCCTAATTTCAAGGTATAGAGCATCTGTGCGTAAACAATCATCTAAGGCGGAGATGATTGATGCTCTATACAAGCCTTTGGAAGATGGGAAAGATGATGGCATGATCAGAGAACTGCTTTTGGATTTCTATTATTCAAGTAATGGACAAAAACCAACTCAAATTATTGTCTTCAGGGATGGAGTTAGTGAATCGCAATTTAATCAGGTTTTGAACATTGAGCTGGACCAAATAATTAAGGCCTATCAACATCTTGGAGATGGTGATGCTCCCAAGTTTACTGTAATTGTGGCACAAAAGAATCATCATACAAAGTTGTTTCATGCTAATGGTTCGGATAATGTGCCTCCTGGTACAGTCATTGACACAACAATTGTGCATCCAAGGAATTATGATTTCTACATGTGTTCGCATGCAGGGATGCTTGGAACTCCTAGGCCGGCACATTACCATGTTTTAGTAGATGAGATTGGTTTCTCAGCGGATGGCATACAAAATTTAATTCATTCGCTATCTTATGTGTACCAGAGGAGTACAGCTGCAACTTCAGTCGTGGCACCCATATGCTATGCCCACCTCGCCGCTGCTCAGATGAGGCAATTTTTGAAGTCTAATTGTTCATCAGAGACATCCTTAAGTGTGACCACTGAAATAGATGTTCCGATCCCAGAGCTTCCGAGGTTGCATGGGAATGTTCAGAGTAGTATGTTCTTCTGTTGA 2703 0.4158 MEKVTHTDADEMPALHPPISDAPHNAKPEQACPIKYSIVSRRGLGTMGKHMLVLANHFQVSVGAPDAVFFQYCVCITLENDRAVESKGIARKLIDRLYQTYSSDLGGKRFAYDGGKTLYTVGPLPHQKLEFTVVLEESLAKCSNGGPGADGSLSLGNKKSKHSFKSKAFNVKISFAAKVPLQSIALALEGVESDSNAQDALRVLDIILRQQAASMSCLLVRQSFFRDDSRNFTDVGGGVTGVQGFHSSFHPTKGGLSLNMDVSTTLILTPGPVIDFLLSNQSVREPRFIDWAKAKRMLKNLRVRASHRSQEYKIISLSEKPCNQQLFSMKVKNGEGNNGVETVDITVHEYFSKHCGIELASAYLPCLDVGKPKRPIYLPIELCSLIPLQRYTKALSPMQRASLVEKSRQKPQDRIKTITDAMTTHLYDDDPILAACGFSIKKQFTQVEGRVLEAPRLMVGKNDECLPCNGRWNFKNKTLLQPAHIDLWAVVNFSARCDTSYLSRELIRCGMNKGIKIERPYTLIEEDAQIRRSSPVARVEKMFELLYAKLLDEPDFILCVLPERKNCDIYGPWKKKCLTEVGVVTQCISPLKMNDQYLTNVLLKINSKLGGINSLLAIENSGQIPLINDTPTLILGMDVSHGSPGQSDIPSIAAVVGSRCWPLISRYRASVRKQSSKAEMIDALYKPLEDGKDDGMIRELLLDFYYSSNGQKPTQIIVFRDGVSESQFNQVLNIELDQIIKAYQHLGDGDAPKFTVIVAQKNHHTKLFHANGSDNVPPGTVIDTTIVHPRNYDFYMCSHAGMLGTPRPAHYHVLVDEIGFSADGIQNLIHSLSYVYQRSTAATSVVAPICYAHLAAAQMRQFLKSNCSSETSLSVTTEIDVPIPELPRLHGNVQSSMFFC 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2459 900 Pfam Argonaute linker 1 domain 220 266 IPR014811 -
Mibi05g2459 900 Pfam N-terminal domain of argonaute 50 208 IPR032474 -
Mibi05g2459 900 SMART Piwi_a_2 556 864 IPR003165 GO:0003676
Mibi05g2459 900 Gene3D - 451 617 - -
Mibi05g2459 900 Gene3D paz domain 264 391 - -
Mibi05g2459 900 SMART PAZ_2_a_3 271 409 IPR003100 GO:0005515
Mibi05g2459 900 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 30 866 - -
Mibi05g2459 900 SMART DUF1785_2 218 270 IPR014811 -
Mibi05g2459 900 FunFam Protein argonaute 3 624 900 - -
Mibi05g2459 900 MobiDBLite consensus disorder prediction 1 27 - -
Mibi05g2459 900 Pfam Piwi domain 556 864 IPR003165 GO:0003676
Mibi05g2459 900 CDD PAZ_argonaute_like 270 386 - -
Mibi05g2459 900 ProSiteProfiles Piwi domain profile. 556 864 IPR003165 GO:0003676
Mibi05g2459 900 ProSiteProfiles PAZ domain profile. 295 387 IPR003100 GO:0005515
Mibi05g2459 900 Pfam PAZ domain 274 403 IPR003100 GO:0005515
Mibi05g2459 900 Pfam Argonaute linker 2 domain 413 458 IPR032472 -
Mibi05g2459 900 FunFam Protein argonaute 7 265 391 - -
Mibi05g2459 900 SUPERFAMILY Ribonuclease H-like 552 862 IPR012337 -
Mibi05g2459 900 Gene3D - 623 900 IPR036397 GO:0003676
Mibi05g2459 900 CDD Piwi_ago-like 431 863 IPR045246 -
Mibi05g2459 900 SUPERFAMILY PAZ domain 265 422 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2459 Mibi-ChrMibi05 44948157 44960464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2459 41 900 Eukaryotic Initiation Factors Gene Family AT5G43810 37.556 5.09e-173 526