Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2457 ATGAAAGTTGCGGAACTCCAAATTCAACTTCATCACCCTCACCATCACCATCATCATCATCATCATCATCATCATCATCATCAAAAGCAGAACAACGAGACTGCTCAGATGTGTAGGAAGATCCAATTAGGTGTTGCCGCCGATGATTTTGACGACAACGACAACGACGGCGAGGAATTCTTCGTTCCTCCTCTCAATTTTGCTACTGTTGATAATGGCATTTTCAGGTCTGGCTTCCCTGAGCCCGCCAATTTCTCCTTCCTCCAAACCCTAGGCCTTCGCTCCATCATATATCTATGTCCTGAGCCGTACCCTGAGGAAAACATGGAATTCCTGAGATCAAATGGGATTAAGCTTCATCAATTTGGGATTGAAGGTCGCAAGGAGCCTTTTGTAAATATTCCAGAGGACACAATCCGTGAAGCACTGAAAGTTGTCCTTGATGTCAAAAACCATCCGGTTTTAATTCATTGTAAGCGAGGAAAGCACCGTACAGGTTGTCTTGTAGGATGCTTGAGAAAGCTGCAAAAATGGTGCTTAACATCAGTGTTTGATGAGTACCAGCGATTTGCAGCTGCCAAAGCAAGAGTTTCTGACCAGAGATTTATTGAGTTGTTCGACATTTCGAGCCTGAAGCATCTGCCCATGTCATTCTCATGTTCAAAGAGGTGA 672 0.442 MKVAELQIQLHHPHHHHHHHHHHHHHHQKQNNETAQMCRKIQLGVAADDFDDNDNDGEEFFVPPLNFATVDNGIFRSGFPEPANFSFLQTLGLRSIIYLCPEPYPEENMEFLRSNGIKLHQFGIEGRKEPFVNIPEDTIREALKVVLDVKNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLTSVFDEYQRFAAAKARVSDQRFIELFDISSLKHLPMSFSCSKR 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2457 223 MobiDBLite consensus disorder prediction 11 34 - -
Mibi05g2457 223 MobiDBLite consensus disorder prediction 11 29 - -
Mibi05g2457 223 CDD PFA-DSP_Siw14 61 207 - -
Mibi05g2457 223 FunFam probable tyrosine-protein phosphatase At1g05000 60 210 - -
Mibi05g2457 223 Gene3D Protein tyrosine phosphatase superfamily 60 210 IPR029021 -
Mibi05g2457 223 ProSitePatterns Tyrosine specific protein phosphatases active site. 156 166 IPR016130 GO:0016311|GO:0016791
Mibi05g2457 223 Pfam Tyrosine phosphatase family 62 213 IPR004861 -
Mibi05g2457 223 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 61 208 IPR029021 -
Mibi05g2457 223 PRINTS Plant and fungal dual specificity phosphatase signature 98 111 IPR020428 GO:0016791
Mibi05g2457 223 PRINTS Plant and fungal dual specificity phosphatase signature 134 148 IPR020428 GO:0016791
Mibi05g2457 223 PRINTS Plant and fungal dual specificity phosphatase signature 61 78 IPR020428 GO:0016791
Mibi05g2457 223 PRINTS Plant and fungal dual specificity phosphatase signature 117 131 IPR020428 GO:0016791
Mibi05g2457 223 PANTHER TYROSINE-PROTEIN PHOSPHATASE 32 213 - -
Mibi05g2457 223 ProSiteProfiles Dual specificity protein phosphatase domain profile. 66 220 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2457 Mibi-ChrMibi05 44878218 44880422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2457 54 223 Protein tyrosine phosphatase (PTP) family AT4G03960 77.059 2.34e-100 288