Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2359 ATGAACAATAATCTGGCATTTCTTGCAAGAACTGTTGCAGCAAAATTTCATCGCCCATCTTCATTGCGAATCTATTGTTCGTCATCCTCAGAGCCTTCTCCTCCTTCCAGCAATAAGCTCTTTGTCGGAGGGTTGTCATGGTCTGTGGATGAGAAGTCCCTTAAAGATGCGTTCTCTTCATTTGGTGAAGTCACTGAAGTGAGGATAGCATATGATAAAGACAGTGGCAGGTCTAGAGGGTTTGGATTTGTCATATTTTCAGATGACGAATATGCCAAAACTGCAAAAGACGCAATGGATGGCAAGGCACTCTTAGGAAGACCCTTGAGAATAAATTTTGCTCTTGAGAAGGTACGAGGGGGACCTGTTGTGGTCCCTCGGATTTCAGATATCGGTCACAGAAATAGGCGCCGCACTTAA 420 0.4429 MNNNLAFLARTVAAKFHRPSSLRIYCSSSSEPSPPSSNKLFVGGLSWSVDEKSLKDAFSSFGEVTEVRIAYDKDSGRSRGFGFVIFSDDEYAKTAKDAMDGKALLGRPLRINFALEKVRGGPVVVPRISDIGHRNRRRT 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2359 139 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 17 117 - -
Mibi05g2359 139 SMART rrm1_1 39 112 IPR000504 GO:0003723
Mibi05g2359 139 Gene3D - 25 139 IPR012677 -
Mibi05g2359 139 SUPERFAMILY RNA-binding domain, RBD 29 135 IPR035979 GO:0003676
Mibi05g2359 139 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 40 110 IPR000504 GO:0003723
Mibi05g2359 139 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 38 116 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2359 Mibi-ChrMibi05 40993572 40999984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2359 36 117 C2H2 Transcription Factor Family AT2G19380 36.585 9.55e-13 62.4