Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2345 ATGCAACCCAAAAGCCATAATGCTTTAGTATTAGCAGTGTTCTTCCAAATTCTGTTGTTAGAAACAACTTTTCTCATCAACAATGTAGAATCCAAGTGTCTCAAAGGATGCCCTTTAGCTTTAGCGTCCTACTTATTAAACCACCAAAACACCAGTCTAGGCAATATAACTCATTTTCTGAAATCAAATCTTGTGTCATCAGATCCTCAATTTATTTCCAGTTACAATGAAAAAGGAATGGTATCCAACAATAATGGAGTCCACAATATTCAATCCTTCACGAGAATCAACATTCTTTTCCCTTGTGAATGTATCAACAATCTTGGTTTTCTGGGTCATGTGTTTGAGTACACAATATCAGAAGGAGACACTTATGATTCCATTGCGACACAAACATATTCTTCGTTGACTTCAGTGGATTTACTAAGAAGATTCAATAGCTATAGTGATCCAAATCAGCTTCCTCTCAATGGGAAGCTTAATGTAACAGTGAAATGTTCTTGTGGGAACAGACAGATTTCTAAGGATTATGGATTGTTTATTACTTATCCACTTGGGTTTGAAGATAGCTTGGAATCCATTGTGAACCGGACTGGTATTGATGCAACGTTGCTTCAGAGTTATAATCCTGGTGTTAATTTTAGCCAGCAGAGTGGAGTGGTTTTCATTCCAGGAAAAGAACAAAATGGAAATTACATGCCCCTGGACCCTAGGTCAAAAGGTTCCAGTGGCGTTGCTAGTAGTACTGGTCTTAGAGGCATCATGGAAGGAAAATCTATGGAGTTTTCATATCAAGAAATAGCAAAAGCTACCAATAACTTCAGCTTCGATAACAGGATTGGTCAAGGAGGTTTTGGAACAGTATATTATGCCGAGCTAAGAGGCCAGAAAACTGCAATCAAGAAGATGGATATAAAAGCATCACAAGGGTTTCTTGCTGAGCTGAAGATTTTAACGCATGTTCATCATTTGAATCTGGTGCGGTTGATCGGATATTGTGTGGAGGGATCGCTCTTTCTTGTTTACGAATACATTAACAATGGAGACTTAAGCCATCATTTGCGTTCCTCAGGTATAGATGTATTGCCATGGTCTACAAGGGTGCAAATTGCTTTGGATTCAGCAAGAGGTCTTGAATATATCCATGAACACACAGTGCCCATATATATCCATCGTGACGTAAAGTCTTTGAACATATTAATCGACAAAACCTTCCATGCCAAGGTTGCAGATTTTGGGTTAAGTAAACTCATTGAAGTTGGAAATGCCTCGCTTAATACTCGTCGTCTAGTTGGAACATTTGGCTACATGTCTCCCGAATATGCTCAATATGGAATAACATCTCCAAAAATAGATGTATATGCTTTTGGAGTGGTACTTTATGAACTCATTTCTGCTAAGAATGCTGTTATCAAGACAAGTGGTGAATTTGTTGTTGAATCAAAAGGCCTTGTAGCTCTGTTTGAGAAGTGTCTTCGTAGGCCTGATGCTGTTGAAGATCTTCGCAACCTTGTGGATCCTAGACTTGGACAAAACTACCCCATTGAGTCAGTTTATAAGATGGCCCAACTTGCTAGAGCTTGTACACAAGATGATCCACAACTACGCCCCACAATGAGATCTATTATTGTAGCTCTTATGACACTTTCTTCTTCTACTGATGAAGATTGCAACGTTGTTGGCTCAGCCTTCTCTGATAATCAAACTATCGTAAATCTACTCTCTGGAAGATAA 1734 0.3881 MQPKSHNALVLAVFFQILLLETTFLINNVESKCLKGCPLALASYLLNHQNTSLGNITHFLKSNLVSSDPQFISSYNEKGMVSNNNGVHNIQSFTRINILFPCECINNLGFLGHVFEYTISEGDTYDSIATQTYSSLTSVDLLRRFNSYSDPNQLPLNGKLNVTVKCSCGNRQISKDYGLFITYPLGFEDSLESIVNRTGIDATLLQSYNPGVNFSQQSGVVFIPGKEQNGNYMPLDPRSKGSSGVASSTGLRGIMEGKSMEFSYQEIAKATNNFSFDNRIGQGGFGTVYYAELRGQKTAIKKMDIKASQGFLAELKILTHVHHLNLVRLIGYCVEGSLFLVYEYINNGDLSHHLRSSGIDVLPWSTRVQIALDSARGLEYIHEHTVPIYIHRDVKSLNILIDKTFHAKVADFGLSKLIEVGNASLNTRRLVGTFGYMSPEYAQYGITSPKIDVYAFGVVLYELISAKNAVIKTSGEFVVESKGLVALFEKCLRRPDAVEDLRNLVDPRLGQNYPIESVYKMAQLARACTQDDPQLRPTMRSIIVALMTLSSSTDEDCNVVGSAFSDNQTIVNLLSGR 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2345 577 SMART serkin_6 274 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g2345 577 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 245 559 IPR044812 GO:0019199|GO:0045087
Mibi05g2345 577 ProSiteProfiles Protein kinase domain profile. 274 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g2345 577 Pfam LysM domain 117 160 IPR018392 -
Mibi05g2345 577 ProSitePatterns Protein kinases ATP-binding region signature. 280 302 IPR017441 GO:0005524
Mibi05g2345 577 ProSiteProfiles LysM domain profile. 115 162 IPR018392 -
Mibi05g2345 577 FunFam PTI1-like tyrosine-protein kinase 3 345 559 - -
Mibi05g2345 577 CDD LysM 117 162 IPR018392 -
Mibi05g2345 577 Gene3D Phosphorylase Kinase; domain 1 250 344 - -
Mibi05g2345 577 Gene3D Transferase(Phosphotransferase) domain 1 345 568 - -
Mibi05g2345 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 389 401 IPR008271 GO:0004672|GO:0006468
Mibi05g2345 577 SUPERFAMILY Protein kinase-like (PK-like) 255 546 IPR011009 -
Mibi05g2345 577 Pfam Protein tyrosine and serine/threonine kinase 275 545 IPR001245 GO:0004672|GO:0006468
Mibi05g2345 577 FunFam LysM receptor kinase 2 253 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2345 Mibi-ChrMibi05 40363030 40370009 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2345 9 577 Receptor kinase-like Gene Family AT3G21630 49.371 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mibi05g2345 PK_Tyr_Ser-Thr 2.1e-45 CL0016