Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2342 ATGCGATCCCAAGTTCTTACAGAGTACAACGACATCGTTAGCTATAACAAAGACCAAACATTCAGCCAATATTATGTCCAATCCAATACAAGAATCAATGTCCCATTCCCATGTGATTGTCTTCAAGATGGATCTATTGGTCATGTGTTCCAGCACAAGATCAACCAAGGGGATACTTACAAGACTATTGCTGAGACTTACTATTCCAATTTGGTCACTGTTGATTGGTTGAGGAAGCTGAATGGTGACACAATACCTGAAAGTGGAACACTTAATGTTACTGTTAATTGTTCATGTGGTGACAGGGAAGTATCAAAACAGTATGGTTTGTTCATCACATGGCCACTTATGCCTAAGGATAGTTTGGAATCAATTGCCAGTAAAGAGAATCTTGATGCTGGGTTGCTTCAGAGGTATAATCTGGGTGTGAATTTCAGTCAAGGGAGTGGATTGGTTTATATACCTGGCAAAGTTCCAGAGAAGGTTGCAGATTTTGGATTGGCTAAACTCACTGAAGTGGGAAACTCATCACTTCCCACTGGTCATCTTGTGGGAACATTTGGATATATGCCACCAGAATATGCTCAGTATGGTGATGTCTCCCCTAAGGTAGATGCCTACGCTTTTGGAGTTGTTCTTTTTGAACTTATTTCTGCCAAGGAAGCAATTGTCAAGCCAACTCAATCCGATGCTGACTCAAAGGGCCTTGTAACAATGGTCATTCTTAAATATTAA 735 0.4054 MRSQVLTEYNDIVSYNKDQTFSQYYVQSNTRINVPFPCDCLQDGSIGHVFQHKINQGDTYKTIAETYYSNLVTVDWLRKLNGDTIPESGTLNVTVNCSCGDREVSKQYGLFITWPLMPKDSLESIASKENLDAGLLQRYNLGVNFSQGSGLVYIPGKVPEKVADFGLAKLTEVGNSSLPTGHLVGTFGYMPPEYAQYGDVSPKVDAYAFGVVLFELISAKEAIVKPTQSDADSKGLVTMVILKY 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2342 244 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 157 IPR044812 GO:0019199|GO:0045087
Mibi05g2342 244 SUPERFAMILY Protein kinase-like (PK-like) 105 224 IPR011009 -
Mibi05g2342 244 ProSiteProfiles Protein kinase domain profile. 1 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g2342 244 Pfam LysM domain 52 86 IPR018392 -
Mibi05g2342 244 Gene3D Transferase(Phosphotransferase) domain 1 140 242 - -
Mibi05g2342 244 CDD LysM 52 86 IPR018392 -
Mibi05g2342 244 Pfam Protein kinase domain 161 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2342 Mibi-ChrMibi05 40327159 40331391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2342 149 237 Receptor kinase-like Gene Family AT3G21630 59.551 1.06e-21 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mibi05g2342 Pkinase 5.4e-11 CL0016