Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2341 ATGCGATCCCAGATTCTCACAGACCCAAACAACATCGTCAGCTACAACAAAGACCAAACAATCTCCAAGGATTATGTTCAATCCACTACAAGAATCGATGTCCCTTTCCCATGTGATTGTCTTCAAGACGGATCTCTTGGTCATTTGTTTCAGTACCAGATTAATCAAGGGGATACCTACAAGAAAATAGCTGAGACGTACTATTCCAATTTGACTACTGTTGAGTCCTTGAGGAAGCTTAATGGAGACACAATACCTGCAAGTGGAACACTTAATGTTGCTGTTAGTTGTTATTGTGGTAACAGCCAGGTGTCAAAGCTCTATGGATTGTTCATCACATGGCCACTTAGGCCTGAGGATACTTTGGCGTCAATTGCCAGTAATCAAAATGGCATCTACGTTCCTATGAAGTCTAGTTCCGGAGCAGCAGGTTTGTCTGGCGGGGTAATTGCTGGAATATCTGTTGGAGTAGTGGCTGGACTTCTGCTGTTGGCAGTTTCTATATATTTTGGATATTTCAGAAAGAAGATGGAAGATACAAGACCACTGTCTCAAGATTTCCAAGAGTTCTCTGTTAATGAAGAGAAGGGGTATGGTGCTCCTACTGGCATCTCAGTGGACAAATCAGTGGAGTTCTCATATGAAGAACTAGCTTCTGCTACAAATAACTTCAGTGTGGCTTTTAAAATTGGTCAAGGAGGCTTTGGTGCTGTCTATTATGCAAAGCTGAGAGGCGAGAAAGCCGCAATCAAGAAGATGGATATGCAAGCAACAAGAGAATTTCTAGCTGAATTGAAAGTCCTAACAAATGTTCATCACCTTAACCTGGTGCGCTTAATTGGATATTGCACTGAGAACTCTCTTTTCTTGGTGTATGAATACATCGATAATGGAAACTTAAGTCAACATCTGCGTGACACAGGAAGAGATCCGCTGCCATGGCCCACCCGAGTTCAAATTGCTTTGGATTCAGCCAGAGGCCTTGAATATATTCATGAGCATACAGTTCCTGTTTATATCCATCGTGACATAAAGTCGGCAAATATATTGATAGATAAGAGCTTCCATGGGAAGGTTGCAGATTTTGGGTTAACTAAACTGGCTGAAGTAGGAAACTCATCACTTCCCACTGGTCATCTTGTGGGAACTTTTGGATATATGCCACCAGAATATGCTCAGTACGGTGATGTCTCACCTAAGGTTGATGTCTACGCTTTTGGAGTTGTTCTTTTTGAACTTATTTCTGCCAAGGAAGCGATTGTCAGGACAACTCAGTCCGATGCTGACTCAAAAGGCCTAGTAACAATGTTTCATGGAGTTCTTAATCAGCCTGATCCTTCTGAAGATCTTCGCAAATTGGTTGATCCAAGGCTTGGGGATGACTACCCTACCGACTCAGTTTTGAAAATGGCTCAACTTGCAAAAGCATGCACACAAGAGAATCCCCAGCTGCGTCCTACTATGAGATCTATTGTAGTTGCACTCATGACACTTTATTCTTCCACTGCTGATGATTGGGATGTTGGTGCCTTCTACAATAATCCGAATCTCATGAATCTGATGTCAGGAAGATAA 1575 0.4229 MRSQILTDPNNIVSYNKDQTISKDYVQSTTRIDVPFPCDCLQDGSLGHLFQYQINQGDTYKKIAETYYSNLTTVESLRKLNGDTIPASGTLNVAVSCYCGNSQVSKLYGLFITWPLRPEDTLASIASNQNGIYVPMKSSSGAAGLSGGVIAGISVGVVAGLLLLAVSIYFGYFRKKMEDTRPLSQDFQEFSVNEEKGYGAPTGISVDKSVEFSYEELASATNNFSVAFKIGQGGFGAVYYAKLRGEKAAIKKMDMQATREFLAELKVLTNVHHLNLVRLIGYCTENSLFLVYEYIDNGNLSQHLRDTGRDPLPWPTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKSFHGKVADFGLTKLAEVGNSSLPTGHLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLFELISAKEAIVRTTQSDADSKGLVTMFHGVLNQPDPSEDLRKLVDPRLGDDYPTDSVLKMAQLAKACTQENPQLRPTMRSIVVALMTLYSSTADDWDVGAFYNNPNLMNLMSGR 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2341 524 Gene3D Transferase(Phosphotransferase) domain 1 295 510 - -
Mibi05g2341 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 339 351 IPR008271 GO:0004672|GO:0006468
Mibi05g2341 524 Gene3D Phosphorylase Kinase; domain 1 209 294 - -
Mibi05g2341 524 CDD STKc_IRAK 230 492 - -
Mibi05g2341 524 Pfam Protein tyrosine and serine/threonine kinase 229 494 IPR001245 GO:0004672|GO:0006468
Mibi05g2341 524 SMART serkin_6 224 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g2341 524 SUPERFAMILY Protein kinase-like (PK-like) 207 495 IPR011009 -
Mibi05g2341 524 ProSitePatterns Protein kinases ATP-binding region signature. 230 252 IPR017441 GO:0005524
Mibi05g2341 524 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 509 IPR044812 GO:0019199|GO:0045087
Mibi05g2341 524 Pfam LysM domain 52 89 IPR018392 -
Mibi05g2341 524 ProSiteProfiles Protein kinase domain profile. 224 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g2341 524 FunFam PTI1-like tyrosine-protein kinase 3 295 509 - -
Mibi05g2341 524 FunFam LysM receptor kinase 2 203 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2341 Mibi-ChrMibi05 40313536 40324069 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2341 4 524 Receptor kinase-like Gene Family AT3G21630 57.420 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mibi05g2341 PK_Tyr_Ser-Thr 3.3e-46 CL0016