LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi05g2340	ATGCCACTCAGATTCAAGTTTCCACTTCTCTTCTCATTGTTATTACTTTCCCTTTGCTTCAACGCAGAATCGAAGTGCAAAAACCCATGCGACTTGGCTTTAGCTTCCTACTATATTGCAGACCAAATTAGCAATCTCACAGCCCTTTGGAGGCTTATGCAATCCCCAATCCTTGAAAAGCCTGAAGATATCGTCAGCTATAACCAAGGCTTAAATAAAGACTTCATTGAACCCAACATTCGAGTGAATGTCCCGTTCCCTTGCGATTGCATCGAAGGGGAAAACCTAGGTTATGTATTCAAGTATCCGATTCAGAAATCGGACACCTATTTGAAGATTGCGAATCAGACGTATTCCAATTTGACCACTGATTCTTCGTTGCAGAGCATGAATGGCTATTCGCCTAACAATATTCCTGATTATGTAACGCTCAATGTGGCTGTGAATTGTAAGTGTGGGGATAGCCATATTTCGAAACAGTATGGGTTGTTTGTCACCTACCCACTTAGAGAGGAGGATTCTTTGGATTCAATTGCGAATCAAACAAAGATTGATCCTGAGTTGCTGCAAAGGTATAATCCTGGCGTTGATTTCAACCAAGGGAGTGGGTTGGTGTATATCCCGGGGAAAGTTCTTGCTTGTTCTGTGACAAGCAGAAGGAGCACAAAAGGTCTAAAAGGTGGGGCTATTGCTGGAATATCTGCTGGAGCAGTAGTTGTTCTCCTATTGGCTGCTTGTATTGGTGTCGTACACTACCAAAAGAAAAAGGAGCAGGAGCAAAAGTTGCTTTCAGGCGAATTAGCAGCCTACTCTTCTCAACGTGGGAAAGATTCCAATGGTCCTCCTGCTTCTGTTGATACCAGTAACACTGCAACTACTGTGGACAAATCAGTGGAGTTCTCATATGAAGAATTGGCTCAAGCTACAAATAACTTCAGTATTGCAAATAAAATTGGTCAAGGTGGTTTTGGGACCGTCTACTATGCAGAGCTGAGAGGGGAGAAAGCTGCAATAAAAATGATGGAGTCGCAAAAATCAAAGCAGTTTCTTGCTGAATTGAAAGTGTTAACGCACGTTCATCACCTAAACCTGGTACGCTTGATTGGATATTGTGTTAAGAAGGATTCTCTTTTTCTTGTATATGAATACATTGACAATGGAAACTTAACCGAACACCTGCAAGGTTCAGGGAGAGAAACATTGCCTTGGTCTACCAGGTTGCAAATTGCTATGGATTCAGCCAGAGGTCTTGAATACATTCATGAGCATACACGGCCTGTATATATTCATCGTGATATAAAGTCGGCTAATATATTGATAGATCGAAACTTCCGTGCAAAGGTTGCAGATTTTGGGTTGACCAAGCTGATTGAAGTGGGAAGTTCATCAATTCCCACCGCTAATATCGCAGGCACATTTGGTTATATGCCACCCGAATATGCATATGGTAGTGTTTCACCAAAAATTGATGTCTATGCTTTTGGAGTTGTTCTTTATGAACTTATATCTGCTAAAAAAGCTGTAATGAGGGTTGGTGAAGCGGGTTCTGCAACAACAAAAGGCCTTGTCTCTTTGTTTGATGAAGCTCTTGGGCAGCCTAATCCAAAAGAACATATTCAAAAGCTTGTTGATCCTAGTCTCGGAGACCAATGCCCAATCGAGTCAGTCTACAAGGTGGCACAAATCGCCAAAATGTGCACGGAGGGAGACCCTGAGCGACGTCCAAGTATGAGATCTATTGCAGTGTCTCTCATGGCACTTTCTTCTACATCTGTGGAATGGGATATTGCCTCCTTGCATGAAAATCCAACACTCGCAAACATGATGTCTGGAAGGTAG	1839	0.4241	MPLRFKFPLLFSLLLLSLCFNAESKCKNPCDLALASYYIADQISNLTALWRLMQSPILEKPEDIVSYNQGLNKDFIEPNIRVNVPFPCDCIEGENLGYVFKYPIQKSDTYLKIANQTYSNLTTDSSLQSMNGYSPNNIPDYVTLNVAVNCKCGDSHISKQYGLFVTYPLREEDSLDSIANQTKIDPELLQRYNPGVDFNQGSGLVYIPGKVLACSVTSRRSTKGLKGGAIAGISAGAVVVLLLAACIGVVHYQKKKEQEQKLLSGELAAYSSQRGKDSNGPPASVDTSNTATTVDKSVEFSYEELAQATNNFSIANKIGQGGFGTVYYAELRGEKAAIKMMESQKSKQFLAELKVLTHVHHLNLVRLIGYCVKKDSLFLVYEYIDNGNLTEHLQGSGRETLPWSTRLQIAMDSARGLEYIHEHTRPVYIHRDIKSANILIDRNFRAKVADFGLTKLIEVGSSSIPTANIAGTFGYMPPEYAYGSVSPKIDVYAFGVVLYELISAKKAVMRVGEAGSATTKGLVSLFDEALGQPNPKEHIQKLVDPSLGDQCPIESVYKVAQIAKMCTEGDPERRPSMRSIAVSLMALSSTSVEWDIASLHENPTLANMMSGR	612

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi05g2340	612	Gene3D	Phosphorylase Kinase; domain 1	284	383	-	-
	Mibi05g2340	612	Gene3D	Transferase(Phosphotransferase) domain 1	384	601	-	-
	Mibi05g2340	612	ProSiteProfiles	LysM domain profile.	165	214	IPR018392	-
	Mibi05g2340	612	SUPERFAMILY	Protein kinase-like (PK-like)	287	584	IPR011009	-
	Mibi05g2340	612	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	428	440	IPR008271	GO:0004672\|GO:0006468
	Mibi05g2340	612	Pfam	Protein tyrosine and serine/threonine kinase	314	582	IPR001245	GO:0004672\|GO:0006468
	Mibi05g2340	612	FunFam	LysM receptor kinase 2	291	383	-	-
	Mibi05g2340	612	FunFam	PTI1-like tyrosine-protein kinase 3	384	598	-	-
	Mibi05g2340	612	SMART	serkin_6	312	586	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi05g2340	612	ProSitePatterns	Protein kinases ATP-binding region signature.	318	339	IPR017441	GO:0005524
	Mibi05g2340	612	ProSiteProfiles	Protein kinase domain profile.	312	587	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi05g2340	612	PANTHER	CHITIN ELICITOR RECEPTOR KINASE 1-RELATED	11	598	IPR044812	GO:0019199\|GO:0045087

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi05g2340	Mibi-ChrMibi05	40278816	40289931	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi05g2340	13	612	Receptor kinase-like Gene Family	AT3G21630	54.397	0.0	630

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LysM	Mibi05g2340		PK_Tyr_Ser-Thr	6.7e-48	CL0016