Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2338 ATGCTGAACCGACCCACTTGCTCAGGATCATTCTTCCGCCATCCATTCATGCCCAAAGCGTGAATTCCAAATGAGTTTGTGAGAAGATTTGAGGATGAACTATCCACTAGTGAGGCATCCCTTTGTGTTCCAAATGGTCGTGTATGGAAGATGGAGATGAAGAAATCTGAAAACGAAGTTTGGTTGTGTAAGGGTTGGGAGGAATTTTTTAAATGCTACTCTCTTAGTTTTGGCTTCTTTTTAGTATTCAAATATCAAGGCAATTCACAGTTCAGTGTGGTGATCTTTGATTCGAGTGCTACTGAGATTCACTATCCACTCAAACCTAAACCTCAGAAGCAGAACTCAGTAGTAACTAAATGTAGCAGAAAAAGGCCTTACAGATTTGATCACTGTGGCTACAAGACAAGGAGCAAGAGGCAGAAGTTGGGAGATGAAGAAGAAATAATTGACATAGAAGATGGTAAATCAGGAAATAGGGATAGAAATGGGGAAGAAGAAATTGGTGATTCAAAATGGGGAAGGGTTGGATCAGTTTCGCAAGGGCCAACAATGTGGAGAAAGGAGACAAGTGTGTGTTTGAGCTTATCAAGTGGAACAGGAACTTTGTATTTCAAGTTACCATATTTGCTTGTTGACGATGCTGTTGATGATAATGATAATGCAAAGAAATGTTTAGCTACTTATTACTTTTGGCTGACTCTTTTCTGGTTTACTCTATTCCTCTGCGTTGTAATTCTCGACTAG 747 0.3976 MLNRPTCSGSFFRHPFMPKAXIPNEFVRRFEDELSTSEASLCVPNGRVWKMEMKKSENEVWLCKGWEEFFKCYSLSFGFFLVFKYQGNSQFSVVIFDSSATEIHYPLKPKPQKQNSVVTKCSRKRPYRFDHCGYKTRSKRQKLGDEEEIIDIEDGKSGNRDRNGEEEIGDSKWGRVGSVSQGPTMWRKETSVCLSLSSGTGTLYFKLPYLLVDDAVDDNDNAKKCLATYYFWLTLFWFTLFLCVVILD 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2338 248 ProSiteProfiles B3 DNA-binding domain profile. 22 99 IPR003340 GO:0003677
Mibi05g2338 248 Pfam B3 DNA binding domain 21 98 IPR003340 GO:0003677
Mibi05g2338 248 SUPERFAMILY DNA-binding pseudobarrel domain 19 99 IPR015300 -
Mibi05g2338 248 PANTHER B3 DOMAIN-CONTAINING 21 145 - -
Mibi05g2338 248 CDD B3_DNA 22 97 IPR003340 GO:0003677
Mibi05g2338 248 Gene3D - 8 100 IPR015300 -
Mibi05g2338 248 SMART B3_2 12 99 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2338 Mibi-ChrMibi05 40232345 40234446 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2338 22 105 B3 DNA Binding Superfamily AT3G18990 47.619 2.69e-23 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi05g2338 B3 3.5e-12 CL0405