Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2335 ATGAGTTACAAAAGGCGTCACCGGCGAAACTTTCAACGGCCATCGTCTTCTCCGGCCAATATTGAACCTTTCCACTTCCTCAAGATCATTCTTCCGCCATCCATTCATGCCCAAAACATGAGAATTCCAAATGAGTTCGTGAGAAGATTTGAGGGTGAACTATCCACTAATGAGGCAACCATTTGTGTTCCAGATGGTCGTGTTTGGAAGATAGAGATGAAGAAATCTGAAAATGAAGTTTGGTTTTGTAAGGGTTGGGAGGAATTTTTTAAATACTACTCTCTTAGTTTTGGCTTCTTTTTAGTGTTCAACTATGAAGGCAATTCAAAGTTCAGTGTGGTGATCTTTGATTCGAGTGCTGCTGAGATTCACTATCCACTCAAACTTAAACCTCAGAAGCAGAACTCAGTAGTAACTAAATGCAGCAGAAAAAGGCGGTACAAATTTTATCATTGTGGCTACAAGACAAGGAGCAAGAGGCAGAGGCTGGAAGATGAAGAAGAAATAATTGACATAGAAGGTGAGAATGCATTAGAAGATGGTAAATCAGGAAATGGGGATAGAAATGGGGAAGAAGAAATTGATGATTCAAGTAAGCATGAGAAAAAGAAAAATAGGTGTGGGCAAGGTCTTTATTCAAGAATAAGGAAGAGAGCTTTGATGAAAAGGCAAAGAGCTATTAAAACTGCCCAGAATATCAAACCATCAAGACCACCATCCTTCACTGCAATAATAAGGCCAACTAATCTGCAAAGATGTTATTTGGATGTGCTGGGATTATTTTGGAAGGAGCATATGGGGAAAATATGTCCAATGAAGCTGGAGGATAGTGAAGGGCGAAGATGGAAGGTGAATTATGGTAAACGTGTGTCATCCGTCAGAATAGGGATGGGTTGGATTAGTTTCGCAAGGGCCAACAATGTGAAGGAAGGAGACAAGTGTGTGTTTGAGCTTATCAAGTGGAACAGGAACTTCGTATTTCAAGTTACCATAGTTGCTTAATCGAAGTGTAAGAAGGGGTGTGATGTTTCTCTTGCCTCCTATTACTTTTGGCCTGGTCTTCTAGATATAACCTATTTTCCCCAGATAATGCAATCTCCGGTTCTTCAGAAAACCCAAGATATTATAGACTACAACAAAGGCCAAGTAACTGAAAACTATGTCGAGACCGAATCTCGTGTGAACCTATTTGCCGAACAATTTCCTGGGACGCTGAATGTGACGGTGAATTGTTCATGTGGGGATAGGCATGTTTCGAAAGATTATGGATTGTTCATCACTTACCCACTTAGAGCTGAGGATTCTTTGGATTCCATTGCCAATCTGACGAATCTTGATCGAGATTTGCTGCAATGGTATAATCCTGATGCTGATTTCAACAAAGGGAGTGGTGTGGTGTATATCCCGGGAAAAGATCTAAACGGTGGGGCTATTGCTGGATTATCTGCTGGAGCAGGAGCTTTGTTTCTCTTATTAGCAGCTTATTCCAATGGTCCTCCTCCTAGTATTTCTGTGGAGAAGTCAGTGGAGTTCTCATATGAAGAACTAGCTCGAGCAACACACAACTTCAGCTTGGCACATAAAATTGGTGAAGGTGGTTTTGGAGCTGTCTACTATGCGGAGCTGAGAGGCGAGGTACGCTTGATTGGTTATTGTGTGAAGAAGCATTTTCTTTTCCTGGTATATGAATATATTGACAACGGAAACTTAAGCGAACACCTATGTGATTCAGAGAGAGAACCCTTACCATGGTCAATGCGAGTGCAAATTGCTTTGGATTCTGCCAGAGGTCTTGAATACATTCACGAGCATACAATGCCTGTATATGTTCATCGTGACATAAAGCCAGCTAACATATTGATAGACAAAAACTTCCATGCAAAGGTTGCAGATTTTGGGTTAACCAAACTGCTTGAAGTGGGAAGTTCATCATATCTCACTGAACATCTTGTAGGAACAATTGGTTATATACCACTCCGGAATGATGGTAGTGTTAAAACTGATGTCTATGCTTTTGGAGTTGTTCTCTATGAACTTATATCTGGTAAAGGAGCTGTGTTCAGCATCCGTGAAGCTGGTTCTGAAGCAAAAACCCTCGTCTCTTTGTTTGAAGAAGCTCTAGAGCAGTCTAATCCAAAGGAACATCTTCTTAAGCTTATTGATCCTAGGTTTGAGGGCGAATTTACATTCAATTCAGTTTACAAGATGGTCCAACTAGCCAGGGCGTGTACGGAGGAAAAACCAGAAAGTCGTCCCAGTATGAGATCTGTAGTGGTGGCTCTAATGACAGTCTCTTCTTCCATGGAATAG 2310 0.4121 MSYKRRHRRNFQRPSSSPANIEPFHFLKIILPPSIHAQNMRIPNEFVRRFEGELSTNEATICVPDGRVWKIEMKKSENEVWFCKGWEEFFKYYSLSFGFFLVFNYEGNSKFSVVIFDSSAAEIHYPLKLKPQKQNSVVTKCSRKRRYKFYHCGYKTRSKRQRLEDEEEIIDIEGENALEDGKSGNGDRNGEEEIDDSSKHEKKKNRCGQGLYSRIRKRALMKRQRAIKTAQNIKPSRPPSFTAIIRPTNLQRCYLDVLGLFWKEHMGKICPMKLEDSEGRRWKVNYGKRVSSVRIGMGWISFARANNVKEGDKCVFELIKWNRNFVFQVTIVAXSKCKKGCDVSLASYYFWPGLLDITYFPQIMQSPVLQKTQDIIDYNKGQVTENYVETESRVNLFAEQFPGTLNVTVNCSCGDRHVSKDYGLFITYPLRAEDSLDSIANLTNLDRDLLQWYNPDADFNKGSGVVYIPGKDLNGGAIAGLSAGAGALFLLLAAYSNGPPPSISVEKSVEFSYEELARATHNFSLAHKIGEGGFGAVYYAELRGEVRLIGYCVKKHFLFLVYEYIDNGNLSEHLCDSEREPLPWSMRVQIALDSARGLEYIHEHTMPVYVHRDIKPANILIDKNFHAKVADFGLTKLLEVGSSSYLTEHLVGTIGYIPLRNDGSVKTDVYAFGVVLYELISGKGAVFSIREAGSEAKTLVSLFEEALEQSNPKEHLLKLIDPRFEGEFTFNSVYKMVQLARACTEEKPESRPSMRSVVVALMTVSSSME 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2335 769 ProSiteProfiles B3 DNA-binding domain profile. 25 119 IPR003340 GO:0003677
Mibi05g2335 769 SMART serkin_6 523 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g2335 769 MobiDBLite consensus disorder prediction 174 208 - -
Mibi05g2335 769 MobiDBLite consensus disorder prediction 175 208 - -
Mibi05g2335 769 ProSitePatterns Protein kinases ATP-binding region signature. 529 555 IPR017441 GO:0005524
Mibi05g2335 769 FunFam PTI1-like tyrosine-protein kinase 3 565 769 - -
Mibi05g2335 769 CDD B3_DNA 239 329 IPR003340 GO:0003677
Mibi05g2335 769 CDD B3_DNA 24 117 IPR003340 GO:0003677
Mibi05g2335 769 ProSiteProfiles Protein kinase domain profile. 477 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g2335 769 Gene3D Transferase(Phosphotransferase) domain 1 565 769 - -
Mibi05g2335 769 Gene3D - 220 335 IPR015300 -
Mibi05g2335 769 SUPERFAMILY DNA-binding pseudobarrel domain 236 337 IPR015300 -
Mibi05g2335 769 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Mibi05g2335 769 Pfam B3 DNA binding domain 244 331 IPR003340 GO:0003677
Mibi05g2335 769 Pfam B3 DNA binding domain 26 118 IPR003340 GO:0003677
Mibi05g2335 769 Gene3D Phosphorylase Kinase; domain 1 502 547 - -
Mibi05g2335 769 SMART B3_2 26 119 IPR003340 GO:0003677
Mibi05g2335 769 SMART B3_2 241 335 IPR003340 GO:0003677
Mibi05g2335 769 SUPERFAMILY DNA-binding pseudobarrel domain 21 119 IPR015300 -
Mibi05g2335 769 SUPERFAMILY Protein kinase-like (PK-like) 499 762 IPR011009 -
Mibi05g2335 769 ProSiteProfiles B3 DNA-binding domain profile. 272 335 IPR003340 GO:0003677
Mibi05g2335 769 Pfam Protein tyrosine and serine/threonine kinase 546 760 IPR001245 GO:0004672|GO:0006468
Mibi05g2335 769 Gene3D - 19 121 IPR015300 -
Mibi05g2335 769 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 403 494 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2335 Mibi-ChrMibi05 40115295 40129855 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2335 325 767 Receptor kinase-like Gene Family AT3G21630 43.952 2.35e-139 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mibi05g2335 PK_Tyr_Ser-Thr 1.5e-29 CL0016
TF B3 Mibi05g2335 PK_Tyr_Ser-Thr 1.5e-29 CL0016