Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2315 ATGGTATTCAGATTCAGGTTGCCACTCCTCTTCTTGTTGAGATTATTCTCTCTGTGTCTAAATGCAGAATCCAAGTGTAAGAAGGGGTGTGACTTTGCTCTTGCCTCCTATCACATTTGGCCTGGTCTTCTCGATGTAACCTATCTTCCGAAGATAATGCAATCTCCAGTTTTTCAGAAAAACAAAGATATTATCGGCTACAACAAAGACCTATTTATAACCGAATACTACGTCGAGACTGGATCTCGATTGAACGTTCCGTTCCCTTGCGATTGCATCAATGGCGAATTTCTGGGTTACATATTCAAGTACCAAATTCAGAAAAACGATACCTATTCTTTGATTGCGAATCAGAGCTATGCCAATTTGACCACTGTTTCGATGTTGGAAAGTGTGAATAGCTATTTGCCGAACAATTTCCCTGATTCTGGGACGCTCAATGTGACGGTGAATTGTTCATGTGGGGATAGGCATGTTTCGGAAGATTATGGGTTGTTCATCACTTACCCACTTAGAGCTGAGGATTCGTTGGAGTCCATTGCGAATCAAACAAAGATTGATCCAGAGTTGCTGCGAAGGTACAATTCTGGTGTTGATTTCAACAAAGGGAGTGGTGTGGTGTATATCCCGGGAAAAGATCTAAACGGTGGGGCTATTTCTGGATTATCTGCTGGAGCAGGAGTTTTGTTTCTCTTATTAGCAGCTTATTCCAATGGTTCTCCTGCTAGTATTTCTGTGGAGAAGTCAGTGGAGTTCTCATATGAAGAACTAGCTCAAGCAACACACAACTTCAGTATGGCACATAAAATTGGTGAAGGTGGTTTTGGAGCTGTGTACTATGCGGAGCTGAGAGGCGAGGTACGCTTGATTGGTTATTGTGTTAAGAAGCATTTTCTTTTCCTTGTATATGAATATATTGACAACGGAAACTTAAGCGAACACCTATTGAATTCAGCAAGAGAACCCTTACCATGGTCACTGCGAGTGCGAATTGCTTTGGATTCAGCCAGAGGTCTTGAATACATTCATGAACATACAGTGCCTGTATATGTTCATCATGACATAAAGCCAGCTAATATATTGATAGACCAAAATTTCCATGCAAAGGTGGCAGATTTTGGATTAACCAAACTTATTGAAGTGGGAAGTTCATCATATCTCTCTGAACATCTTGCAGGAACATTTGGTTATATACCTTTTAGGAATGATGGTAGTGTCAAAACCGATGTTTATGCTTTTGGAGTCGTTCTCTATGAACTTATATCAGCTAAAGAAGTTGTGTTCAGTGTCGATGAAGCTGGTTCTGAAGCAAAAACCCTTGTCTCTTTGGTGATTTTTGAAGAAGCTCTTGAGCAGTCTAATCCAAAGGAACATCTTCTTAAGCTTATTGATCCTAGGCTTGAAGGCGAATTTACATACGATTCAATTTACAAGATGGTCCAACTAGCCAGGGCATGCACGGAGGAAGAACCAGAAAGTCGTCCCAGTATGAGATCTGTAGTGGTGGCTCTAATGACACTCTCTTCTATGGAATAG 1536 0.4095 MVFRFRLPLLFLLRLFSLCLNAESKCKKGCDFALASYHIWPGLLDVTYLPKIMQSPVFQKNKDIIGYNKDLFITEYYVETGSRLNVPFPCDCINGEFLGYIFKYQIQKNDTYSLIANQSYANLTTVSMLESVNSYLPNNFPDSGTLNVTVNCSCGDRHVSEDYGLFITYPLRAEDSLESIANQTKIDPELLRRYNSGVDFNKGSGVVYIPGKDLNGGAISGLSAGAGVLFLLLAAYSNGSPASISVEKSVEFSYEELAQATHNFSMAHKIGEGGFGAVYYAELRGEVRLIGYCVKKHFLFLVYEYIDNGNLSEHLLNSAREPLPWSLRVRIALDSARGLEYIHEHTVPVYVHHDIKPANILIDQNFHAKVADFGLTKLIEVGSSSYLSEHLAGTFGYIPFRNDGSVKTDVYAFGVVLYELISAKEVVFSVDEAGSEAKTLVSLVIFEEALEQSNPKEHLLKLIDPRLEGEFTYDSIYKMVQLARACTEEEPESRPSMRSVVVALMTLSSME 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2315 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Mibi05g2315 511 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 242 286 IPR044812 GO:0019199|GO:0045087
Mibi05g2315 511 Gene3D Transferase(Phosphotransferase) domain 1 306 511 - -
Mibi05g2315 511 FunFam PTI1-like tyrosine-protein kinase 3 306 511 - -
Mibi05g2315 511 SMART serkin_6 264 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g2315 511 Pfam LysM domain 172 198 IPR018392 -
Mibi05g2315 511 SUPERFAMILY Protein kinase-like (PK-like) 240 504 IPR011009 -
Mibi05g2315 511 ProSitePatterns Protein kinases ATP-binding region signature. 270 296 IPR017441 GO:0005524
Mibi05g2315 511 Pfam Protein tyrosine and serine/threonine kinase 287 503 IPR001245 GO:0004672|GO:0006468
Mibi05g2315 511 Gene3D Phosphorylase Kinase; domain 1 236 287 - -
Mibi05g2315 511 ProSiteProfiles Protein kinase domain profile. 208 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2315 Mibi-ChrMibi05 39384151 39393014 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2315 12 509 Receptor kinase-like Gene Family AT3G21630 48.067 2.05e-172 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mibi05g2315 PK_Tyr_Ser-Thr 1.2e-27 CL0016