Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2314 ATGGGAAACCCCACCCGGGGGGGGGGGGGGTATTCTAGAATTCCAAATGGGTTTGTGAGAAGATTTGAGGAAGAACTATCCACTAGTGAGGCAACCATTTGTGTTCCAGATGGTCATGTGTGGAAGATGGAGATGAAGAAATCTGAAAACGAAGTTTGGTTGTGCAAGGGTTGGGAGGAATTTTTTAAATACTACTCTCTTAGTTTTGGTTTCTTTTTAGTGTTTAACTATGAAGGCAATTCACAGTTCAGTGTGGTGATCTTTGATTCTACTGCTGCTGAGATTCACTATCCACTGAAACTTAAACCTCGGAAGCAGAATTCGGTGGTAACTAAATGTACAAGAAAAAGGCTGTACAGGTTTGATCATTGTGGCTACAAGACAAGGAGCAAGAAGCAGAAGCTGGAAGATGAAGAAGAAATAATTGACATAGAAGATGAGAATGCATTAGAAGATGGTAAAGCAGGAAATAGGGATAGAAACGGGGAAGAAGATCTTGGTGATACAAGTAAGCATGAGAAAGAGAAAAATAGGTGTAGGCAAGGACTTTATTCCAGAATAAGGAAGAGAGCTGTGATAAAAAGGCAAAGAGCTGTAAAAACTGTCCAGAATTTCAAGCCACCAAAACCTCCATCCTTCACTGCAATAATAAGGCCAACTAATCTGAAAAGATGTTACTTGGATGTGCCGGGATTATTTTGGAAGGAGCATATGGGGAAAATGTGTCCTATGAAGCTGGAGGATAGTGAAGGTCGAAGATGGAAGGTGAATTATGGTAAACGTGCGTCATCTATCAGAATAGGGATGGGCTGGATCAGTCTCGCAAGGGCCAACAATGTGAAGGAAGGAGACAAGTGTGTGTTTGAGCTTATCAAGTGGAACAGGAACTTTGTATTTCAAGTTACCATATTTGCTTGTTGA 921 0.4115 MGNPTRGGGGYSRIPNGFVRRFEEELSTSEATICVPDGHVWKMEMKKSENEVWLCKGWEEFFKYYSLSFGFFLVFNYEGNSQFSVVIFDSTAAEIHYPLKLKPRKQNSVVTKCTRKRLYRFDHCGYKTRSKKQKLEDEEEIIDIEDENALEDGKAGNRDRNGEEDLGDTSKHEKEKNRCRQGLYSRIRKRAVIKRQRAVKTVQNFKPPKPPSFTAIIRPTNLKRCYLDVPGLFWKEHMGKMCPMKLEDSEGRRWKVNYGKRASSIRIGMGWISLARANNVKEGDKCVFELIKWNRNFVFQVTIFAC 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2314 306 Gene3D - 6 92 IPR015300 -
Mibi05g2314 306 PANTHER B3 DOMAIN-CONTAINING 13 299 - -
Mibi05g2314 306 SUPERFAMILY DNA-binding pseudobarrel domain 207 304 IPR015300 -
Mibi05g2314 306 MobiDBLite consensus disorder prediction 150 179 - -
Mibi05g2314 306 Gene3D - 192 306 IPR015300 -
Mibi05g2314 306 CDD B3_DNA 13 89 IPR003340 GO:0003677
Mibi05g2314 306 Pfam B3 DNA binding domain 10 90 IPR003340 GO:0003677
Mibi05g2314 306 Pfam B3 DNA binding domain 214 304 IPR003340 GO:0003677
Mibi05g2314 306 SMART B3_2 5 91 IPR003340 GO:0003677
Mibi05g2314 306 SMART B3_2 213 305 IPR003340 GO:0003677
Mibi05g2314 306 ProSiteProfiles B3 DNA-binding domain profile. 1 91 IPR003340 GO:0003677
Mibi05g2314 306 CDD B3_DNA 211 304 IPR003340 GO:0003677
Mibi05g2314 306 ProSiteProfiles B3 DNA-binding domain profile. 212 306 IPR003340 GO:0003677
Mibi05g2314 306 SUPERFAMILY DNA-binding pseudobarrel domain 10 90 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2314 Mibi-ChrMibi05 39378510 39379915 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2314 13 304 B3 DNA Binding Superfamily AT3G18990 30.124 4.66e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi05g2314 B3 8.7e-15 CL0405