Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2300 ATGAAATCCCCAATCCTTCAAAACCCTCAAGATATTGTCAGCTATAACAAAGGCATACTATCTACCATAAACTATGTCCAATCCACCACTCGCGTGAACGTTCCCTTCCCTTGCGATTGCATCAATGGTGAATTTCTGGGTCATGAATTCAAGTACCAAATTCAAACAGGGGATTCATATGTGAAGGTTGCGAATCAGAGCTTTTCAAATCTGACTACTGTTTCGATGTTGGAGAGTGTGAATCGCTATTCGCAGAACAATTTCCCTGATTCTGGGACGCTGAATGTGATGGTGAATTGTTCATGTGGGGATAGGCATGTTTCGAAAGATTATGGATTGTTCATCACTTATCCTCTTAGAGCTGATGATTCTTTGGATTCCATTGCGAAGAAGATGAATCTTGATCCAGAGTTGCTGCAGAAGTATAATCCTAGTGTTGACTTTAGCAAAGGGAGTGGTGTGGTGTATATCCCGGGAAAAGCTCAAAAGAAAACTGCAATAAAAAAGATGGAGTCACAAAAATCAAGAGAGTTTCTTGCTGAATTGAAAGTGTTAACACGTGTTCATCACCTAAACTTGGTTGCAGATTTTGGATTGACCAAGCTCACTGAAGTGGGAAGTTCAGCACTTCCCACTGATAATCTTGCAGGCACATTTGGAGAATTTTCTAATAAATGGATATATGCATATGGTAGTGTTTCACCAAAACTTGACGTATTTGCTTTTGGAGTTGTCCTCTATGAACTTATATCTGCTAAAGAAGCATTGTTCAGGGCTGGGGAATCTAATTCTGATACAAAAGGCCTTGTCTCTTTGTTTGAAGAAGCACTTGAGAAACCTAATTGTAAAGAACAGCTTCAAAACCTTGTAGATCCTAGACTTGGTAACCAATACACAATTGATTCAGTTTACAAGATGGCACAGCTCGCCAAAGAGTGCACAGATGGAGATCCAGACCAACGTCCAAGCATGAGATCTGTTGTGGTAACTTTGATGACACTTTCTTCCACTTCTGTGGAGTTGGATATTTCTGCCTCCTTGCATGAAAATCCAACATTCACCAAGCAAAATTAGCAATTTGTGGTGATCTTTGATTCGAGTGCTGCTGAGATTCACTATCCACACAAACTTAAACCTCAGAAGCAGAAGTCGGTAGTGACTAAATGTAGCAGAAAAAGGCCGTACAGATTTGATCATTGTGGCTATAAAACAAGGAGTAAGAGGCAGAGGGTGGGAGATGAAGAAGAAATAATTGACATAGAAGATGAGAATGCGTTAGAAGATGGTAAATCAGGAAATAGGGATAGAAGTGGGGAAGAAGAAATTGAAGGTTCAAGTAAGCATGAGAAGGAGAAAAATAGGTGTGGGCAAGGACTTCATTCAAGAATAAGGAAGAGAGCTTTGATAAAAAGGCGAAGAGCTGTGGAAACTGCTCAGAATAATAAACCACCAAAACTACCATCCTTCACTGCAATAATAAGGCCAACTAATCTGCAAAGATGTTATTTGGAGCATATGGGGAAAATGCGTCCTATGAAGTTGGAGGATAGTGAAGGGCGAAGATGGAAGGTGAATCATGGTAAATGTGCCTCATCTATCAGAATAGGCAAGGGTTGGATCGATTTCGCAAGGGCCAACAGTGTGAAGGAAGGAGACAAGTGTGTGTTTGAGCTTATCAAGTGGAACAGGAACTTTACTCTTTTCTGGTTTACTCTGCGTCGTAATGCTTGA 1731 0.4055 MKSPILQNPQDIVSYNKGILSTINYVQSTTRVNVPFPCDCINGEFLGHEFKYQIQTGDSYVKVANQSFSNLTTVSMLESVNRYSQNNFPDSGTLNVMVNCSCGDRHVSKDYGLFITYPLRADDSLDSIAKKMNLDPELLQKYNPSVDFSKGSGVVYIPGKAQKKTAIKKMESQKSREFLAELKVLTRVHHLNLVADFGLTKLTEVGSSALPTDNLAGTFGEFSNKWIYAYGSVSPKLDVFAFGVVLYELISAKEALFRAGESNSDTKGLVSLFEEALEKPNCKEQLQNLVDPRLGNQYTIDSVYKMAQLAKECTDGDPDQRPSMRSVVVTLMTLSSTSVELDISASLHENPTFTKQNXQFVVIFDSSAAEIHYPHKLKPQKQKSVVTKCSRKRPYRFDHCGYKTRSKRQRVGDEEEIIDIEDENALEDGKSGNRDRSGEEEIEGSSKHEKEKNRCGQGLHSRIRKRALIKRRRAVETAQNNKPPKLPSFTAIIRPTNLQRCYLEHMGKMRPMKLEDSEGRRWKVNHGKCASSIRIGKGWIDFARANSVKEGDKCVFELIKWNRNFTLFWFTLRRNA 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2300 576 MobiDBLite consensus disorder prediction 413 458 - -
Mibi05g2300 576 Pfam B3 DNA binding domain 510 569 IPR003340 GO:0003677
Mibi05g2300 576 MobiDBLite consensus disorder prediction 424 458 - -
Mibi05g2300 576 Gene3D Transferase(Phosphotransferase) domain 1 180 352 - -
Mibi05g2300 576 ProSiteProfiles Protein kinase domain profile. 9 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g2300 576 SUPERFAMILY Protein kinase-like (PK-like) 162 328 IPR011009 -
Mibi05g2300 576 SMART B3_2 489 576 IPR003340 GO:0003677
Mibi05g2300 576 CDD LysM 115 147 IPR018392 -
Mibi05g2300 576 Pfam Protein kinase domain 194 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g2300 576 CDD B3_DNA 487 567 IPR003340 GO:0003677
Mibi05g2300 576 ProSiteProfiles B3 DNA-binding domain profile. 512 576 IPR003340 GO:0003677
Mibi05g2300 576 SUPERFAMILY DNA-binding pseudobarrel domain 484 573 IPR015300 -
Mibi05g2300 576 Gene3D - 469 571 IPR015300 -
Mibi05g2300 576 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 162 194 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2300 Mibi-ChrMibi05 38957117 38970793 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2300 170 343 Receptor kinase-like Gene Family AT3G21630 45.989 3.37e-39 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mibi05g2300 Pkinase 2.2e-08 CL0016
TF B3 Mibi05g2300 Pkinase 2.2e-08 CL0016