Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi05g2268 | ATGGACGGAATTGAAGAGAAAATAGCAGACATGTTCCATGGCCAAGCCCAATTGTACAGACTCATGTATCTTTGGATGTCTTCTTTTTGTCTCAAGTGTGCCGTTGAGCTTGAAATACCAGACATAATCCACAAGCATGGAAAACCCATCTCTCTTTCTCACTTGGTATTGGCTCTCAAAATTTCACCCTCTAAATCTACCTTTATAAAAGGGCTCATGCGCTTGCTTGCTCACAATGGCCTATTTGCTATCATCAAAAGCAACAACAATGAAGAAGAAAGTGATGAAGTAGCGTATGATCTCACTTCTGCATCAAAACTTCTTCTGCATGGCATAGACCATTGTTTATCTTCAATGGTTCAGTTGACTGTAAACCCAGCTTCGCTTGATATGTATCAAAACTTGGGGAAATGGGTTCGTGGGAAGGATAAAACATTGAGAGAGACATCAGGTGGGGTAGGTTTTTATGAATATTTTACTCAAAACCCAGTTGATTTAGCAGCCTTTCAAGAAGCAATGGCTAGTGATTCTAGATTCATGAAACTGGCACTGAGAGATCTGAAATCTGTTTTTGATGGACTAAGTTCCATTGTTGATGTTGGTGGTGGAACTGGTACAACTGCTAAAATTATCTCTGAAGCATTCCCCGAGTTGAAATGTATAGTGCTGGATCTCCCAGAGGTTGTTGCAAACTTACCTGGAAACACCAATTTGGATTTTGTTGGTGGGAACATGCTCAAATCCATCCCTCATGCTGATGCAGTTCTGATCAAGTGGGTTTTACATGACTGGAGCGATGATGATTGCGTAAAAATACTTAAAAATGCTAAGGAAGCTATTTCAAGCAATGGAAAGGGAGGAAAAGTGATCATCATTGATACAGTGTTGAATGAAAAGGAAGACCATCATGAACTGCTAGAGACTCAGCTCTTACTCAACGTAATGTTGTCGGCTGAGTTCAATTCAAAAGAGAGATCTGGGGAAGAATGGAAGCAACTCTTTATGAAAGCAGGCTTCACAGATTACCAGATATTTCCTATATTTGGCTTTAGGTCTCTCATTGTGCTAAATCCTTAG | 1077 | 0.4011 | MDGIEEKIADMFHGQAQLYRLMYLWMSSFCLKCAVELEIPDIIHKHGKPISLSHLVLALKISPSKSTFIKGLMRLLAHNGLFAIIKSNNNEEESDEVAYDLTSASKLLLHGIDHCLSSMVQLTVNPASLDMYQNLGKWVRGKDKTLRETSGGVGFYEYFTQNPVDLAAFQEAMASDSRFMKLALRDLKSVFDGLSSIVDVGGGTGTTAKIISEAFPELKCIVLDLPEVVANLPGNTNLDFVGGNMLKSIPHADAVLIKWVLHDWSDDDCVKILKNAKEAISSNGKGGKVIIIDTVLNEKEDHHELLETQLLLNVMLSAEFNSKERSGEEWKQLFMKAGFTDYQIFPIFGFRSLIVLNP | 358 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi05g2268 | 358 | Gene3D | - | 4 | 108 | IPR036388 | - | |
| Mibi05g2268 | 358 | SUPERFAMILY | "Winged helix" DNA-binding domain | 10 | 110 | IPR036390 | - | |
| Mibi05g2268 | 358 | FunFam | O-methyltransferase ZRP4 | 111 | 358 | - | - | |
| Mibi05g2268 | 358 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 19 | 358 | IPR016461 | GO:0008168 | |
| Mibi05g2268 | 358 | Pfam | O-methyltransferase domain | 132 | 339 | IPR001077 | GO:0008171 | |
| Mibi05g2268 | 358 | CDD | AdoMet_MTases | 197 | 296 | - | - | |
| Mibi05g2268 | 358 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 116 | 355 | IPR029063 | - | |
| Mibi05g2268 | 358 | Pfam | Dimerisation domain | 30 | 77 | IPR012967 | GO:0046983 | |
| Mibi05g2268 | 358 | Gene3D | Vaccinia Virus protein VP39 | 111 | 358 | IPR029063 | - | |
| Mibi05g2268 | 358 | PANTHER | O-METHYLTRANSFERASE | 14 | 342 | IPR016461 | GO:0008168 | |
| Mibi05g2268 | 358 | FunFam | Coniferyl alcohol 9-O-methyltransferase | 3 | 108 | - | - | |
| Mibi05g2268 | 358 | PIRSF | O-mtase | 1 | 358 | IPR016461 | GO:0008168 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi05g2268 | Mibi-ChrMibi05 | 36968443 | 36969961 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi05g2268 | 31 | 344 | Monolignol Biosynthesis Gene Families | AT5G54160 | 31.098 | 9.26e-42 | 147 |