Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2226 ATGACCACATTTGCTGGCACATTTGGGTATGCTGCTCCAGAGATTGCTTATATTATGGAAGCAAATGAGAAATGTGATGTTTACAGCTTTGGAGTGTTGATTTTGGAGATCATTATGGGAATACATCCAGGAGAGCTTCTTTCATCTTTGATAGATAAATCTACCACACCTGATATTTTTTTGAAGCATGTGTCGGATCCACGAATCTCGCCACCTGAAAAATTAATCCTTGATGAGGTTGTTGTAGTTGCGAAAATAGCATTTTCTTGTTTGGATGAGAATCCTCGATCTCGTCCGACCATGGAACAAGTAACTACAGAGCTAGAACGGTCACCAAAATCTCATGTGGAAGATCCATTTGACACGATCACAATTGGAGACCTAATGGAGGATTAA 396 0.399 MTTFAGTFGYAAPEIAYIMEANEKCDVYSFGVLILEIIMGIHPGELLSSLIDKSTTPDIFLKHVSDPRISPPEKLILDEVVVVAKIAFSCLDENPRSRPTMEQVTTELERSPKSHVEDPFDTITIGDLMED 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2226 131 Pfam Protein tyrosine and serine/threonine kinase 9 108 IPR001245 GO:0004672|GO:0006468
Mibi05g2226 131 Gene3D Transferase(Phosphotransferase) domain 1 1 124 - -
Mibi05g2226 131 MobiDBLite consensus disorder prediction 96 119 - -
Mibi05g2226 131 PANTHER LEUCINE RICH REPEAT KINASE 2 1 112 - -
Mibi05g2226 131 SUPERFAMILY Protein kinase-like (PK-like) 1 115 IPR011009 -
Mibi05g2226 131 ProSiteProfiles Protein kinase domain profile. 1 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2226 Mibi-ChrMibi05 35860826 35861304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2226 1 114 Receptor kinase-like Gene Family AT1G75820 37.302 9.62e-19 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi05g2226 PK_Tyr_Ser-Thr 5.1e-09 CL0016