Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2222 ATGGATACACTCTTGGGTGAAGAATGCGTTAAAGGTTATATGTTGCCGACAACGGATTTGGTGGGAAAAGATGTACAAAGACACATTCAACAAATATGGAAATGGATAATGGAAAATGAGGTGTCAACAATTGGGATATGGGGAATGGGAGGGGTAGGGAAAACGGCATTAGCAACTCATGTGCATAACAAGCTTTTAGAAGAAGCCGGTGATCATTTTGACAATATTATTTGGATTACTGTGTCACAATTTCATAACAGCATTTACCAGTTGCAAAAAGCCATTGCAACATCAATTAATTTAGACATATATGATGAGTGTGATGTCAAAAGAATATCTGGGATATTATTGCAGGCATCAAAACACCTAAATAGATGTGTCCTTATTTTAGATGATGTATGTGATCCTATCTTTTTAGATGAGGTTGGATTTCCTGTTTCAAATGATAGGATTAAATTGATTTTGACGACTCGTTCTTGGGAAGTGTGCCAAATTATGAATTGCATGAAAAACACACTGAACGTAAGACCTCTAGATGAAGAAGATAGTTGGAACTTGCTTCAAAAGACTCTTGGAATACATCAAATAGAATCGGGTGAGGTGGAGCCTATAGCAAGGACCGTTGCAAATCAATGTGGAGGTTTGCCCCTTGCTATTCTTGGGACAGGAAGAAGCATAAAGGGAAAAAACCACACTAGAGAATGGAAGCATTTGTTGGAATTCTTTCAAGACTGGGACAGCTTTCAACATCACATGGATGAGGGGGTATTTTCAGTATTGAAATCTAGCTATGCATGTTTAAATGATAAGTTGCAAAGGTTTTTTTTGTACTATGCATTGAGTGCATGCAAATATGCCTATGGTAGTTATGTTGATGCTTTGATCAGAAAATTTTACTATGAGGGATGGACATATGAAACGAAGAGCTTAGAGATGCAGTACAGTGAAGGTTATACCATGTTGAATAAATTAAAAAATAATAGCATGTTGACAGGAGAAAATGGTGGTTGGAGAATGAACACTTTGCTCAGGGTCATGGCTATTAATATTGCCAAGAAGACTGGCGAAATTATGGCAAGAACTGATATGAATTTGAGAGAAATACCTGAGAGTGGAGAATGGAAAGCACATCTGCAAAAAGCTTATCTCTCGGGGAATTACATAGACAGAATTTCAAATGGCACATCTCCTAAGTGTTCTAAGCTTTCTGCATTGCATTTAGATCATAATTTTGGTCTCAAATGGATCCCTGATGATTTTTTCAGCAACATGCCTGCTATTGAAATACTTGATTTGTCTCGGACTAGCATTAATCGTTTGCCTGAATCTGTATCTAACTTGGAATGTCTCATTGCTTTATTGCTTTCCGGATGTGATAAATTGAGTTGCATGCCTTCGTTAGCAAAGTTGCAACGGTTGATAGAGTTAGACCTTTCGTTTACTGCCATCTCAGAAACCCCTTGTGGATTGGAATTGCTGGTAAAGCTTAGATTTCTGAATCTTGAAGGTACAGAACAACTGAAGATGTCATCCGCAACAATATCCAAAATGACCCATCTACAATCTCTTAGGTTGATGAATCGGGTCCCAGAATTAAAACATGTGAGTGTTCAAGATCTGCAAGGCTTGACAAAGCTGGAGGTTATCTCAGTCAATTTTTGTGGTATTGAAGAGTTTAATGCCTATGTTAGGAGCTTCCCAGGCAAAGACCACAAACTTAAAGGTTATTGTCTGAATTTAGCTACCTTAAAGAATGCTACTTTGTTTTTGAATGCTTGCTCAATGGACACAAGCAAAGACTATCATAGTAAAAGGGTTGTTGTATGTGGTACTGAATTGGGAATTAGAGCAGCGCTACTTCCAGAAGACATCAGCGAGTTGTCTATAACAAAGTGTGACAATTGGACAAGGACAACATGCCTATGTTGTGTTTTATCATTCAACAAAGATACTTGTAATTTATCAAGAATTGAATGGTTGGAACTAACTCATTGCAGGAAGCTGGAGTACTTGTGTTGTGTCTCACCCATTTGCTCGTTTTGCACCTTTTTCAAATTAGTTGGAAGACTGTCCCTCTACAAAGTAAAAGACCTTAAACAAATTGTGGCACCATATTCTTCTCCATTCTTGGATAGCCCCATTTCTTACCTCAGAATTCTTAATATTTCTGAATGCAACAAAATGAAGTTTGTGTTGAGGCCACAATTATTTGCGCAGCTTCAAGCCTTAGAGACCATTCACATTGATTCTTGTGAGTTGTTGGAAGAAATAGTCGGGGAGAATGATTGTTACAGAAGCGCTTTCACTACTATTACTCTTCCTAAACTGAGATATGTGAACTTAAGATGTCTACCAGCATTAAATTTCTTATTCAGGGGAATCATTCTCTGTCCTTCTCTCAATTATTTTGAGGCTTACAGTTGCGAGAAACTAAGCTTCCCTCGTATGCAGATTGTACAAGGACAAAATCTTTATATCCAGGAGGTGGTGTCAACTGGATACTATTGGATACGTGGCAATCAGGTGTATATCTCCTCCAAAATTTTACTTCCTTATTTTAATGATTAA 2568 0.3769 MDTLLGEECVKGYMLPTTDLVGKDVQRHIQQIWKWIMENEVSTIGIWGMGGVGKTALATHVHNKLLEEAGDHFDNIIWITVSQFHNSIYQLQKAIATSINLDIYDECDVKRISGILLQASKHLNRCVLILDDVCDPIFLDEVGFPVSNDRIKLILTTRSWEVCQIMNCMKNTLNVRPLDEEDSWNLLQKTLGIHQIESGEVEPIARTVANQCGGLPLAILGTGRSIKGKNHTREWKHLLEFFQDWDSFQHHMDEGVFSVLKSSYACLNDKLQRFFLYYALSACKYAYGSYVDALIRKFYYEGWTYETKSLEMQYSEGYTMLNKLKNNSMLTGENGGWRMNTLLRVMAINIAKKTGEIMARTDMNLREIPESGEWKAHLQKAYLSGNYIDRISNGTSPKCSKLSALHLDHNFGLKWIPDDFFSNMPAIEILDLSRTSINRLPESVSNLECLIALLLSGCDKLSCMPSLAKLQRLIELDLSFTAISETPCGLELLVKLRFLNLEGTEQLKMSSATISKMTHLQSLRLMNRVPELKHVSVQDLQGLTKLEVISVNFCGIEEFNAYVRSFPGKDHKLKGYCLNLATLKNATLFLNACSMDTSKDYHSKRVVVCGTELGIRAALLPEDISELSITKCDNWTRTTCLCCVLSFNKDTCNLSRIEWLELTHCRKLEYLCCVSPICSFCTFFKLVGRLSLYKVKDLKQIVAPYSSPFLDSPISYLRILNISECNKMKFVLRPQLFAQLQALETIHIDSCELLEEIVGENDCYRSAFTTITLPKLRYVNLRCLPALNFLFRGIILCPSLNYFEAYSCEKLSFPRMQIVQGQNLYIQEVVSTGYYWIRGNQVYISSKILLPYFND 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2222 855 Gene3D Ribonuclease Inhibitor 361 463 IPR032675 -
Mibi05g2222 855 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 277 IPR027417 -
Mibi05g2222 855 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 29 812 - -
Mibi05g2222 855 Gene3D Ribonuclease Inhibitor 464 825 IPR032675 -
Mibi05g2222 855 Pfam NB-ARC domain 26 264 IPR002182 GO:0043531
Mibi05g2222 855 CDD AAA 51 157 - -
Mibi05g2222 855 Pfam Leucine rich repeat 401 459 IPR001611 GO:0005515
Mibi05g2222 855 Gene3D - 9 175 IPR027417 -
Mibi05g2222 855 Gene3D - 177 268 IPR042197 -
Mibi05g2222 855 PRINTS Disease resistance protein signature 43 58 - -
Mibi05g2222 855 PRINTS Disease resistance protein signature 120 134 - -
Mibi05g2222 855 PRINTS Disease resistance protein signature 212 226 - -
Mibi05g2222 855 PRINTS Disease resistance protein signature 652 668 - -
Mibi05g2222 855 SUPERFAMILY L domain-like 367 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2222 Mibi-ChrMibi05 35754570 35758122 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2222 40 553 WRKY Transcription Factor Family AT5G45050 23.322 8.04e-12 67.4