Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2106 ATGCCATGTGGGGCCCACAAACCACATCGTAACCGTGGAGATACCCACCTTCCCGTGCTTCCCCCAGTTTTCAATTTCACCAGATCACTTTCCAACTCTACCCCTTACACGGTTTTCATTCTCTTGCGTCTGTCATCCTCATTCTCTGTAAGGATGGATTCACTTGAGCCAAATGGAAATGGGAATGATGATAGTTTGCCTCCACCACCTCCTCCGCCTTCTGAAGTCCCACCAAATGTTGTTCCTGTGAAAGCAGAAGAGCTCCCACCTGAACCAGTTAAGAAGAAGCCTTCTCGACTTCCAATAGCTAGAAGGGGCTTGGGATCCAAAGGAAGTAAGCTACAACTTCTCACCAATCACTTCAAAGTTGATGTCAATAACAAGGATGGACATTTCTTCCATTACAGTGTGGCACTTTTTTATGAAGATGGACGACCTGTAGAAGGTAAGGGTGTAGGAAGAAAGGTTATTGATAGGGTACAGGAGACTTACTCTTCTGAGTTAGATGGAAAAGACTTTGCCTATGATGGTGAGAAGAGTTTGTTTACCGTTGGATCTCTTCCTCGAAACAAACTTGAGTTCACGGTTGTTCTGGATGATGTCATATCAAGCAGAAATAATGGAAATTGTAGCCCTGATGGGCATGGAAGTCCACATGAGGGTGACAAGAAGAGAATGCGACGCCCAAATCGTTCGAAAGCGTTTAAAGTGGAGATCAGTTATGCTGCGAAGATTCCGATGCAGGCCATTGCCAATGCATTACGTGGGCAGGAAACTGAGAATTTTCAAGAAGCCATAAGAGTTCTTGATATTATATTGAGGCAAAATGCTGCTAAGAAAGGCTGTCTACTTGTTCGGCAATCCTTCTTCCACAACGACCCAATGAATTTTGCTGATGTAGGTGGTGGTGTTCTCGGCTGTCGAGGTTTTCATTCCAGCTTTAGGACCACTCAGAGTGGCTTATCCCTCAATATTGATGTATCTACCACGATGATAATACAACCTGGCCCTGTGGTGGATTTCTTGATTGCAAACCAGAATGTGAGAGATCCTTCTTCCCTTGACTGGGCCAAGGCCAAAAGGACTCTGAAGAATTTGAGGATTACAGCAAGCCCATCTAATCAAGAGTACAAGATATGTGGACTCAGTGAACTCCCATGTAGTCAGCAGATGTTTACTCTCAAGAGTAAGGGTGATGGTGCAGAAGAGGAAATAACTGTTGAAGAATATTTTGTACGGTATCGTAATATACCGCTTCAGTACTCTGCTAATATGCCTTGCATTAATGTTGGGAAGCCAAAACGGCCAACCTATATTCCGATTGAGCTTTGCTCTTTGGTATCCTTGCAACGTTATACAAAGGCACTCACTACTCTACAAAGGGCTTCGTTGGTTGAAAAGTCTCGGCAGAAGCCACAAGAGCGGATGAAGGTTTTATCCGATGTTTTAAAAGTCAGCAAGTATGATTCTGATCCTATGCTTCAAACTTGTGCCGTTCGAATAAATTCTGGTTTTACACAGGTGGATGGCCGGGTTCTACCAGCTCCAAGGTTGAAGTTTGGCAATGGAGAAGAATTCAATCCAAGAAATGGGAGGTGGAATTTTAACAATAAGACATTTGCGCAGCCAACAAAGATAGAGCGATGGGCCGTGGCAAACTTTTCTGCACGTTGTGATGTGCGAGCTCTTGTTCGGGATCTGACTAGATGTGCAGCAAATAAAGGGATTCAAATAGATGCCCCATTCGATGTATTTGAGGAAAGCCCACAGTTTAGGCGTGCCCCACCTATGGTCAGAGTGGATAAGATGTTTGAATCGATACAGTCAAAACTTCCCGGAGCTCCTCAGTTCCTTCTCTGTCTTCTTCCAGAGCGGAAAAATTGTGATATTTATGGTCCCTGGAAAAAGAAGAATCTTGCCGACTTTGGAATTATTAATCAGTGCATGTGTCCACAGAGGGTCAATGATCAATATCTTACCAATGTGTTGTTGAAAATCAATGCTAAGCTAGGTGGGATGAATTCATTTTTATCTGTTGAGAAATCTCCTAATATGCCTGTTGTTTCCAAAGCTCCTACACTTATACTTGGGATGGATGTGTCCCATGGTTCACCTGGGCAGACCGACATTCCTTCTATTGCGGCGGTGGTGAGCTCCATGCAGTGGCCTTTGATCTCGAAGTATAGGGCATGTGTTCGAACCCAATCTCCAAAGGTTGAAATGATTGATAATCTGTTCAAGCCAGTAGGTGAAAAGGAAGATGAGGGCATTATCAGGGAACTTTTGGTTGAGTTCTATAAAAGTTCTGGGAATAGAAAGCCTGAAAATATAATCATCTTCAGGGACGGAGTGAGCGAGTCACAGTTCACTCAAGTTTTAAACATTGAGCTTAATCAGATCATTGAGGCCTGTAAATTCCTTGATGAACAGTGGAACCCCAAATTTGTTGTCATTGTTGCTCAGAAAAACCACCACACCAAATTTTTCCAGAATGGTTCTCCTGATAATGTACCCCCTGGAACTATCATTGACAACAAAATTTGCCATCCCCGAAATTATGATTTCTACTTGTGTGCACATGCTGGAATGATTGGAACCACTAGGCCGACACATTACCATGTTCTATTAGATGAGCTTGGTTGCTCTGCGGATGAGCTACAGGAATTGGTGCATTCTTTGTCATATGTGTATCAACGGAGCACAACTGCCATATCTGTGGTCGCTCCGGTCTGTTATGCACACCTTGCTGCAACTCAAGTTGGACAGTTCTTGAAATTTGAGGACAAGTCTGAGACTACGTCGAGCCATGGTGGCAACTCATCTGCCTCTGGTGCTCCTGTTCCTCAGTTACCTGCACTGCAGGAAAGTGTCAGCAATTCTATGTTTTTCTGTTGA 2895 0.4383 MPCGAHKPHRNRGDTHLPVLPPVFNFTRSLSNSTPYTVFILLRLSSSFSVRMDSLEPNGNGNDDSLPPPPPPPSEVPPNVVPVKAEELPPEPVKKKPSRLPIARRGLGSKGSKLQLLTNHFKVDVNNKDGHFFHYSVALFYEDGRPVEGKGVGRKVIDRVQETYSSELDGKDFAYDGEKSLFTVGSLPRNKLEFTVVLDDVISSRNNGNCSPDGHGSPHEGDKKRMRRPNRSKAFKVEISYAAKIPMQAIANALRGQETENFQEAIRVLDIILRQNAAKKGCLLVRQSFFHNDPMNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPSSLDWAKAKRTLKNLRITASPSNQEYKICGLSELPCSQQMFTLKSKGDGAEEEITVEEYFVRYRNIPLQYSANMPCINVGKPKRPTYIPIELCSLVSLQRYTKALTTLQRASLVEKSRQKPQERMKVLSDVLKVSKYDSDPMLQTCAVRINSGFTQVDGRVLPAPRLKFGNGEEFNPRNGRWNFNNKTFAQPTKIERWAVANFSARCDVRALVRDLTRCAANKGIQIDAPFDVFEESPQFRRAPPMVRVDKMFESIQSKLPGAPQFLLCLLPERKNCDIYGPWKKKNLADFGIINQCMCPQRVNDQYLTNVLLKINAKLGGMNSFLSVEKSPNMPVVSKAPTLILGMDVSHGSPGQTDIPSIAAVVSSMQWPLISKYRACVRTQSPKVEMIDNLFKPVGEKEDEGIIRELLVEFYKSSGNRKPENIIIFRDGVSESQFTQVLNIELNQIIEACKFLDEQWNPKFVVIVAQKNHHTKFFQNGSPDNVPPGTIIDNKICHPRNYDFYLCAHAGMIGTTRPTHYHVLLDELGCSADELQELVHSLSYVYQRSTTAISVVAPVCYAHLAATQVGQFLKFEDKSETTSSHGGNSSASGAPVPQLPALQESVSNSMFFC 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2106 964 CDD Piwi_ago-like 492 919 IPR045246 -
Mibi05g2106 964 SMART Piwi_a_2 617 925 IPR003165 GO:0003676
Mibi05g2106 964 Gene3D paz domain 329 452 - -
Mibi05g2106 964 SUPERFAMILY PAZ domain 330 488 IPR036085 GO:0005515
Mibi05g2106 964 FunFam Protein argonaute 3 685 964 - -
Mibi05g2106 964 ProSiteProfiles Piwi domain profile. 617 925 IPR003165 GO:0003676
Mibi05g2106 964 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 91 927 - -
Mibi05g2106 964 CDD PAZ_argonaute_like 335 447 - -
Mibi05g2106 964 FunFam Protein argonaute 7 330 452 - -
Mibi05g2106 964 Pfam Argonaute linker 2 domain 474 520 IPR032472 -
Mibi05g2106 964 Pfam Mid domain of argonaute 527 607 IPR032473 -
Mibi05g2106 964 Pfam Argonaute linker 1 domain 285 333 IPR014811 -
Mibi05g2106 964 MobiDBLite consensus disorder prediction 63 85 - -
Mibi05g2106 964 Pfam Piwi domain 618 925 IPR003165 GO:0003676
Mibi05g2106 964 Gene3D - 684 964 IPR036397 GO:0003676
Mibi05g2106 964 MobiDBLite consensus disorder prediction 53 105 - -
Mibi05g2106 964 Pfam PAZ domain 339 464 IPR003100 GO:0005515
Mibi05g2106 964 SUPERFAMILY Ribonuclease H-like 601 923 IPR012337 -
Mibi05g2106 964 SMART DUF1785_2 283 335 IPR014811 -
Mibi05g2106 964 Pfam N-terminal domain of argonaute 113 273 IPR032474 -
Mibi05g2106 964 ProSiteProfiles PAZ domain profile. 360 448 IPR003100 GO:0005515
Mibi05g2106 964 Gene3D - 512 678 - -
Mibi05g2106 964 MobiDBLite consensus disorder prediction 207 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2106 Mibi-ChrMibi05 30808232 30816532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2106 104 964 Eukaryotic Initiation Factors Gene Family AT5G43810 35.491 1.14e-163 504