Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2083 ATGGGCAACTTCTGTATGAAGCCAGTTGCTCATGTTAATTCCTCCAATCTTTCTGGAAGTACAAAGTCAAGTAAAACACAACAGAATTACAATTCATCAGAAAAAAAAGCCACTTCGCAAAGTGCGGCATCAAATCCTATGGTCAGACCCATTTCCAATAATCTAAAGTCCTTTAGCTTCAATGATCTAAAGGAAGCCACCAAGAACTTCCGTGAAGAAAATTTTATTGGAGAGGGAGGTTTTGGGCGTGTCTACAAGGGATGGATTAACATGAACACTTTTGCTCCTTCAAAACCAGGGAGTGGAATGGTAGTGGCCATTAAGCAGCTCAAGCCAGAAAGCTTTCAAGGTCACAAGGAATGGCTTGCTGAAGTCAATTATCTAGGACAGCTTCACCACGAAAATCTGGTGAAACTTATTGGTTATTGTTCAGAGGATAGAAATAGGCTTTTAGTTTATGAGTTCTTGCAAAAAGGAAGCTTGGAGAATCATTTATTTAGAAAAGGTGTTCAACCCATACCTTGGCCAGCCAGGATCAGTATTGCAGTTGGTGTTGCAAGAGGATTAGCATTCATGCATAGCCTAGATGCAAATGTCATCTATCGTGATTTAAAGGCTTCTAACATTCTACTTGATTCGGATTTCCATCCAAAGCTTTCGGATTTCGGTTTGGCCAGAGATGGTCCTACTGGAGATAACACTCATGTCTCAACCAGAGTTATTGGGACCCAAGGTTATGCAGCTCCAGAGTATGTAGCGACAGGTCACTTGACACCTAGGAGTGATGTCTACAGCTTTGGTGTTGTCTTGCTAGAGTTGTTAACTGGGAGACGGGCATTAGAAGATGACAGACCAGGGTCCATAGAAGAAACTCTGGTGGACTGGGCAAAGCCTTTCCTGAACGATAACCGGCGAGTTTTGAGGATCATGGATACGAGGCTAGGCGGCCAATACTCCAAGAAAGCTGCTCAAGCTGCAGCTGCACTTGCATTGCAATGCTTGACCTCAGATCCTAGATACAGACCTCCAATGGTGGATGTTCTTGCTGCATTAGAAGCTCTCAGTTCTTGTTCAAGTTCAACCCCAAGGACCCCAAAATCTTACAGTGACAATCTTTCAAACAGGCATCCTAATCCTAGTCCTAGCCATCCACAAAAGCCAATCAGACATCAAAAGTCTGTCTGA 1185 0.4338 MGNFCMKPVAHVNSSNLSGSTKSSKTQQNYNSSEKKATSQSAASNPMVRPISNNLKSFSFNDLKEATKNFREENFIGEGGFGRVYKGWINMNTFAPSKPGSGMVVAIKQLKPESFQGHKEWLAEVNYLGQLHHENLVKLIGYCSEDRNRLLVYEFLQKGSLENHLFRKGVQPIPWPARISIAVGVARGLAFMHSLDANVIYRDLKASNILLDSDFHPKLSDFGLARDGPTGDNTHVSTRVIGTQGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRALEDDRPGSIEETLVDWAKPFLNDNRRVLRIMDTRLGGQYSKKAAQAAAALALQCLTSDPRYRPPMVDVLAALEALSSCSSSTPRTPKSYSDNLSNRHPNPSPSHPQKPIRHQKSV 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2083 394 ProSitePatterns Protein kinases ATP-binding region signature. 76 108 IPR017441 GO:0005524
Mibi05g2083 394 Gene3D Phosphorylase Kinase; domain 1 45 155 - -
Mibi05g2083 394 Gene3D Transferase(Phosphotransferase) domain 1 156 372 - -
Mibi05g2083 394 MobiDBLite consensus disorder prediction 15 46 - -
Mibi05g2083 394 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 156 365 - -
Mibi05g2083 394 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g2083 394 SMART serkin_6 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g2083 394 CDD STKc_IRAK 76 354 - -
Mibi05g2083 394 MobiDBLite consensus disorder prediction 356 394 - -
Mibi05g2083 394 MobiDBLite consensus disorder prediction 356 379 - -
Mibi05g2083 394 PANTHER OS01G0588500 PROTEIN-RELATED 33 354 - -
Mibi05g2083 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Mibi05g2083 394 FunFam Serine/threonine-protein kinase BIK1 32 155 - -
Mibi05g2083 394 Pfam Protein tyrosine and serine/threonine kinase 74 349 IPR001245 GO:0004672|GO:0006468
Mibi05g2083 394 SUPERFAMILY Protein kinase-like (PK-like) 53 357 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2083 Mibi-ChrMibi05 30296749 30300157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2083 36 370 Glycoside Hydrolase AT3G07070 48.974 2.61e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi05g2083 PK_Tyr_Ser-Thr 3e-47 CL0016