Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2082 ATGTTGGTCTGTTGGTCTGGAGGTTTTAATAACATTGTGTTGTATTCTAATTGTTTGGAAGCAATAGACCTTTGAGCAATGGCGATTGCGGCCCCTGGGCAGCTGAATCTTAATGAGTACCCTTCATGGGGATCTAGAACTGTTGATTGCTTCGAAAAGTTGGAGCAGATTGGCGAGGGAACTTATGGCCAAGTTTACATGGCTAGAGAAATCAGAACAGGTGAAATTGTTGCATTGAAGAAAATAAGAATGGACAATGAGAGAGAGGGGTTTCCTATTACTGCTATTCGTGAAATCAAAATTCTGAAGAAATTACACCATGAAAATGTTATTAAGTTGAAGGAGATTGTGACATCACCAGGCCCTGAGAAAGATGAGCAAGGGAAGCCAGATGGTAACAAATATAAAGGTGGTATCTATATGGTATTTGAATACATGGACCATGATTTGACTGGTCTTGCTGATCGACCTGGGATGAGATTTACAGTTCCACAAATTAAGTGTTACATGAGACAGCTTTTGACGGGGCTTCATTATTGCCATGTGAATCAAGTACTTCATCGTGATATAAAAGGCTCCAATCTTCTCATAGACAATGAAGGCAATCTGAAGCTCGCAGATTTTGGACTGGCACGATCATTTTCTAATGACCACAATGCAAATCTTACAAATCGTGTGATCACATTATGGTATAGACCCCCAGAACTGCTGTTGGGAACAACAAAATATGGACCTGCTGTTGATATGTGGTCTGTTGGATGTATCTTTGCTGAGCTTCTTCACGGAAAACCTATCTTCCCTGGAAAAGATGAGCCGGAACAGCTAAACAAAATTTTTGAGCTTTGTGGAGCACCAGATGAAGTGAACTGGCCTGGAGTTTCCAAGTGTCCATGGTATAATCAATTTAAACCAACAAGACCAATGAAAAGACGTCTGAGGGAAGTCTTCAGACATTTTGATCGTCATGCTTTAGAATTGCTGGAGAGGATGCTGACCCTTGATCCTGCTCAGAGAATTACTGCAAAAGATGCCCTTGATGCTGAGTATTTCTGGGCTGATCCCTTGCCATGTGATCCCAAGAGTTTACCCAAATATGAGTCATCACACGAGTTTCAGACAAAGAAAAAGCGGCAGCAACAACGACAACAACATGAAGAAAATGCCAAGCGTCAGAAAATGCAGCACCCTCAGCAACACACTCGTCTTCCACCCATTCAGCAGTCAGGGCAACCTCATGCCCAGATGCGGCCAGGTCCAAACCAAAATATGCATAACTCACAGCCCGCAGTTGCTGGAGGACCTGGCCATCATTATGGTAAGCCTCGAGGTCCCTCTGGTGGGCCAGGAAGATACCCCCCAGGTGGGAACCCCGGTGGGGGATACAACCACCCAAACCGTGCAGGTCAAGGCGGAGGAGGTGCTTATGGCAGTGGGCCTTATCCTCCTCAAGGCCGAGGAGCACCTTATGGGTCAAGTGGCATGCCTGGTGCCGGACCTCGTGGTGGCGGTGGTGGCGGCTATGGAGTTGGAGGCCCCAATTATCCCCAAGGTGGTCCATACAGTGGCTCAGGGGCTGGCCGTGGTTCAAACATGATGGGGGGAAACCGCAATCAACAATATGGTGGTTGGCAGCAGTAA 1638 0.4628 MLVCWSGGFNNIVLYSNCLEAIDLXAMAIAAPGQLNLNEYPSWGSRTVDCFEKLEQIGEGTYGQVYMAREIRTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGKPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKCPWYNQFKPTRPMKRRLREVFRHFDRHALELLERMLTLDPAQRITAKDALDAEYFWADPLPCDPKSLPKYESSHEFQTKKKRQQQRQQHEENAKRQKMQHPQQHTRLPPIQQSGQPHAQMRPGPNQNMHNSQPAVAGGPGHHYGKPRGPSGGPGRYPPGGNPGGGYNHPNRAGQGGGGAYGSGPYPPQGRGAPYGSSGMPGAGPRGGGGGGYGVGGPNYPQGGPYSGSGAGRGSNMMGGNRNQQYGGWQQ 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2082 545 SUPERFAMILY Protein kinase-like (PK-like) 44 357 IPR011009 -
Mibi05g2082 545 Coils Coil 374 394 - -
Mibi05g2082 545 FunFam Cyclin-dependent kinase C-2 148 391 - -
Mibi05g2082 545 SMART serkin_6 51 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g2082 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Mibi05g2082 545 ProSitePatterns Protein kinases ATP-binding region signature. 57 80 IPR017441 GO:0005524
Mibi05g2082 545 Gene3D Transferase(Phosphotransferase) domain 1 148 390 - -
Mibi05g2082 545 MobiDBLite consensus disorder prediction 361 545 - -
Mibi05g2082 545 CDD STKc_CDK9_like 51 350 - -
Mibi05g2082 545 FunFam Cyclin-dependent kinase C-2 38 147 - -
Mibi05g2082 545 MobiDBLite consensus disorder prediction 397 428 - -
Mibi05g2082 545 MobiDBLite consensus disorder prediction 363 393 - -
Mibi05g2082 545 Gene3D Phosphorylase Kinase; domain 1 38 147 - -
Mibi05g2082 545 MobiDBLite consensus disorder prediction 528 545 - -
Mibi05g2082 545 ProSiteProfiles Protein kinase domain profile. 51 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g2082 545 Pfam Protein kinase domain 51 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g2082 545 PANTHER CELL DIVISION PROTEIN KINASE 49 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2082 Mibi-ChrMibi05 30287752 30295378 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2082 27 545 Core Cell Cycle Gene Families AT5G10270 77.099 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mibi05g2082 Pkinase 2.6e-74 CL0016