Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2058 ATGACTGGACGAAACCCAAACTTTGATGTTAGAGGGCGTTCTATTACACAGGCTCATCTCCGTTCTGACTCTCACTGTCCGGTTTGTCAAGACAAATTTGAACTTGGTTCTGAGGCGAGGATGATGCCATGTAGCCATATTTATCATTCAGACTGTATTGTCCTTTGGTTGGTTCAGCATAATTCATGCCCTGTTTGCCATGTTGAGTTACCGCCTCAGGGACAAAAATTTGATGTTGTTGCAATGTGCTTGAGAAATCCTGTCATGCAGTGA 273 0.4359 MTGRNPNFDVRGRSITQAHLRSDSHCPVCQDKFELGSEARMMPCSHIYHSDCIVLWLVQHNSCPVCHVELPPQGQKFDVVAMCLRNPVMQ 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2058 90 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 15 71 - -
Mibi05g2058 90 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 83 IPR013083 -
Mibi05g2058 90 ProSiteProfiles Zinc finger RING-type profile. 26 67 IPR001841 -
Mibi05g2058 90 SUPERFAMILY RING/U-box 14 73 - -
Mibi05g2058 90 SMART ring_2 26 66 IPR001841 -
Mibi05g2058 90 Pfam Ring finger domain 25 66 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2058 Mibi-ChrMibi05 29475343 29476371 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2058 26 75 C3H Transcription Factor Family AT3G60080 60.000 1.77e-17 73.2