Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g2050 ATGAGGAAGAAACTTGATACTCGTTTCCCTGCCGCTCGGATTAAGAAAATTATGCAATCAGATGAAGATGTGGGGAAGATTGCCATGGCCGTGCCTCTACTTGTTTCTAAAGCACTAGAACTCTTTCTGCAAGATTTATGTGATCGGACATATGAAATAACATTGAGAAGAGGAGCAAAGACAATGAATTCCTTTCACTTAAAACAATGTGTACAGACTTTTAATGTCTTCGATTTTCTGAAAGATATTGTCAGCAAGGTTCCTGATTTAGGTAGCCAGGTTGGTTCTGGAGATGACCGTACTATCTGTAAGAGAAGGAAAGTGGATGAAAATGGAGATGACAGTGATGATGATGCAAAAAGAAATAAGATGCCAGAAAATGCACACCCTTCTGGTGGCAGGGGAAGAGGTCGGGGCAGAGGCAGGGGTCGTGGCCGAGGAAGTAGAACAATGGATCAAGAGATTAATGCACATGTCAAGTCTGAAGATGATCATCATGCTGATGCATTGACGCACCATGACATGCAAACTCACAGCAATGAAAGCATGGAATTTAGTACAGAACATGAAATGAAGCCGTCCATTAGCAAGACATCAGAAGCATGCTTTAGGAATTTTGACTTAAATATGGATCCGGTGGATGATGATGGGAATTCACCAACCAGCAAATTTCCTGCCCCACCTTGTCCAACTGAAAAGCCAACCATAACTTGTCCATTGGAAAAGCCAGCCACAGCTTGTCCACCTGAAAAACCAACCATAGAATTGGAACATGAAGAAATCCCAGGGTGGTCGTTGTCAGATGTGGAAAAAATGGCCATTGATCCCATTCAACTGGTCCACATGAATGGAAAGATGGATGAAGAAGATGAAGATTATGATGTAGAAAGTTGA 894 0.4217 MRKKLDTRFPAARIKKIMQSDEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNSFHLKQCVQTFNVFDFLKDIVSKVPDLGSQVGSGDDRTICKRRKVDENGDDSDDDAKRNKMPENAHPSGGRGRGRGRGRGRGRGSRTMDQEINAHVKSEDDHHADALTHHDMQTHSNESMEFSTEHEMKPSISKTSEACFRNFDLNMDPVDDDGNSPTSKFPAPPCPTEKPTITCPLEKPATACPPEKPTIELEHEEIPGWSLSDVEKMAIDPIQLVHMNGKMDEEDEDYDVES 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g2050 297 SUPERFAMILY Histone-fold 18 88 IPR009072 GO:0046982
Mibi05g2050 297 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 125 - -
Mibi05g2050 297 MobiDBLite consensus disorder prediction 90 152 - -
Mibi05g2050 297 FunFam dr1-associated corepressor homolog 1 86 - -
Mibi05g2050 297 MobiDBLite consensus disorder prediction 99 127 - -
Mibi05g2050 297 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Mibi05g2050 297 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g2050 Mibi-ChrMibi05 29188316 29196855 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g2050 1 126 CCAAT-HAP5 Transcription Factor Family AT3G12480 68.421 3.87e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mibi05g2050 CBFD_NFYB_HMF 1.4e-18 CL0012