Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1992 ATGTTTATTAATAAATCATTTCTGTCTATTACGGACACCCTGGGACTATCGTTCACAGAGGCTCACAGTCAGATCTACTTCAACCTTGCAGCTATCTCCTCTGCCTCTCATTCTGCCGCCGTCTCCGGAAATCCTAAAGGACCAGTAACACTTGACCGCAATTCAAGTGGGATTCTTCCAACAGTTATAGTAAACCCTTATGCTTGGACGCAGGTAGTCAATGTCATGTACGTAGATTTACCGGTTGGCGCAGGATTTTCTTACTCACAAACACAAGAAGGCTACCATACTAGTGATACACTATGGATAGAAAATGCATATGATTTCCTACAAAAGTGGTTTATTGATCATCCTGAGTTTGTATCAAATCCATTTTACATTGGGGGTGGTTCATATTCAGGTTTGCCAACTGTTCCTCTGGTTAAAAAAGTGTATGAAGCAGGTTCCAAAGCAGGAAGCAAGCCACTCATAAATATCAAAGGTTTCCTACTTGCCAGCCCATATACCGATGCATTTCTGGATTCAAACTCAAAAGTTGAATGTGCACACCACTTGAGTCTTTTATCAAATGAGCTTTATGAGTCAATTAAGGCAAGTTGTGATGGTGATTATGTCAACATAAATCCAAATAACACAAAGTGTATCTTAGATTATGAAGCCTTCTCTCAACTGATTCGTTACATAGAGTTGAATCAAATTTTGGAACCTCTTTGCATTACTACTCCAAAAGACAACGAAAGAATTCTCATGGAAGATTCATCAAAAGGGATCCTCCAGTCATGGCAGAAAGTTTCGGGATTCTGGTGCCGTGGTTATGACCACATTCTTATCAACCAATGGGCAAATAATGAGGATGTTAGGAAGGCTCTTCATATAAGAGAGGGAACTAAAGGAGAGTTCTTGAGATGCAACAAGAGTTTGTCGTACAAATATAATCTACATAGTGTTGTAAATTATCATCGCGATCTCACCAAGACAAACCTTCAATGTCTTGTATACTGTGCTGATCTTGACTTGTCAATACCACATATTGGTACACAAGCTTGGATTAAGTCATTGAACTTGAAAATAGATGATCCTTGGCGTGCATGGTTTGTTGATGGACAAGTTGCAGGATACACACAAATTTACAAGAACCATGACTACTTCTTGACATATGTTGCTGTGAAAGGTGCTGGTCATGTAGCCCATCGATATAAACCTAAAGAAGTTCTCCAAATGCTAGACAGGTGGTTCTCATATTCTCTTATTTGA 1254 0.3931 MFINKSFLSITDTLGLSFTEAHSQIYFNLAAISSASHSAAVSGNPKGPVTLDRNSSGILPTVIVNPYAWTQVVNVMYVDLPVGAGFSYSQTQEGYHTSDTLWIENAYDFLQKWFIDHPEFVSNPFYIGGGSYSGLPTVPLVKKVYEAGSKAGSKPLINIKGFLLASPYTDAFLDSNSKVECAHHLSLLSNELYESIKASCDGDYVNINPNNTKCILDYEAFSQLIRYIELNQILEPLCITTPKDNERILMEDSSKGILQSWQKVSGFWCRGYDHILINQWANNEDVRKALHIREGTKGEFLRCNKSLSYKYNLHSVVNYHRDLTKTNLQCLVYCADLDLSIPHIGTQAWIKSLNLKIDDPWRAWFVDGQVAGYTQIYKNHDYFLTYVAVKGAGHVAHRYKPKEVLQMLDRWFSYSLI 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1992 417 Pfam Serine carboxypeptidase 59 413 IPR001563 GO:0004185|GO:0006508
Mibi05g1992 417 Gene3D alpha/beta hydrolase 33 416 IPR029058 -
Mibi05g1992 417 PRINTS Carboxypeptidase C serine protease (S10) family signature 65 77 IPR001563 GO:0004185|GO:0006508
Mibi05g1992 417 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 138 IPR001563 GO:0004185|GO:0006508
Mibi05g1992 417 PRINTS Carboxypeptidase C serine protease (S10) family signature 78 88 IPR001563 GO:0004185|GO:0006508
Mibi05g1992 417 PRINTS Carboxypeptidase C serine protease (S10) family signature 384 397 IPR001563 GO:0004185|GO:0006508
Mibi05g1992 417 SUPERFAMILY alpha/beta-Hydrolases 47 413 IPR029058 -
Mibi05g1992 417 FunFam Carboxypeptidase 267 416 - -
Mibi05g1992 417 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 401 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1992 Mibi-ChrMibi05 26454014 26463975 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1992 280 413 Calmodulin-binding Proteins AT2G22960 43.284 1.67e-35 127