Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1958 ATGACCACATTTGCTATCACATTCGGGTATGCAGCACCAGAAATTGCATTCACTATGAAAGCAAACGAGAAATGTGATGTTTACAGCTTTGGAGTGCTAACTTTAGAAATCATTGTGGGAAAACATCCAACAGAGCTTATTTCATCTTTGGCAGAGAATTCAACAGTTAATGACTTTTTGTTAAAGGACTTGTTGGACCCACGACTTTCTCCACTCACAAAACCAATTTTAGATTATGTGATCTTAATTACAAAAATAGCTTTTTTGTGTTTGAATGATAATCCTCAGTCTCGTCCAACTATGGAACAAGTATGTATAGTGCTTGCAAGTATCCCAAAATCTTATTCAGAGGATCAACTTCACACCATCACAGTTGGACAACTAATGAGAGATTGA 396 0.3636 MTTFAITFGYAAPEIAFTMKANEKCDVYSFGVLTLEIIVGKHPTELISSLAENSTVNDFLLKDLLDPRLSPLTKPILDYVILITKIAFLCLNDNPQSRPTMEQVCIVLASIPKSYSEDQLHTITVGQLMRD 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1958 131 ProSiteProfiles Protein kinase domain profile. 1 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1958 131 PANTHER LEUCINE RICH REPEAT KINASE 2 1 112 - -
Mibi05g1958 131 Pfam Protein kinase domain 1 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g1958 131 Gene3D Transferase(Phosphotransferase) domain 1 1 127 - -
Mibi05g1958 131 SUPERFAMILY Protein kinase-like (PK-like) 2 115 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1958 Mibi-ChrMibi05 25755528 25756012 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1958 1 113 Receptor kinase-like Gene Family AT5G65700 37.500 2.34e-19 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi05g1958 Pkinase 5.3e-09 CL0016