Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1956 ATGGCGACGATCAGTCTCCGTAAGGGTAACACTCGGCTACCACCGGAGGTGAACCGAGTTCTCTACGTTCGAAACCTACCCTTCAATATCACAAGCGAAGAGATGTACGATATCTTTGGAAAGTACGGAGCGATTCGCCAGATTCGTATCGGAACCAACAAGGACACACGTGGCACCGCCTTCGTCGTATACGAGGACATCTACGACGCCAAAACCGCCGTCGATCATCTCTCTGGCTTCAATGTTGCGAATCGGTACTTGATTGTGCTTTATTATCAGCAGGCGAAGATGGGGAAGAAGTTCGATCAGAAGAAGAAGGAGGAGGAGATTGCTAGGATGCAAGAGAAGTATGGGGTCAACACTAAAGATAAGATAGGATCCGCAATAGACTTTCTAAATAAATGCGTTTTTCCAAAACTTGTACTGTAA 429 0.4662 MATISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMGKKFDQKKKEEEIARMQEKYGVNTKDKIGSAIDFLNKCVFPKLVL 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1956 142 FunFam splicing factor 3B subunit 6-like protein 15 118 - -
Mibi05g1956 142 SMART rrm1_1 20 90 IPR000504 GO:0003723
Mibi05g1956 142 CDD RRM_SF3B14 17 93 IPR034150 -
Mibi05g1956 142 SUPERFAMILY RNA-binding domain, RBD 7 101 IPR035979 GO:0003676
Mibi05g1956 142 Gene3D - 15 123 IPR012677 -
Mibi05g1956 142 PANTHER RNA-BINDING MOTIF PROTEIN, X-LINKED 2 21 116 - -
Mibi05g1956 142 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 21 87 IPR000504 GO:0003723
Mibi05g1956 142 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 19 94 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1956 7 124 Eukaryotic Initiation Factors Gene Family AT1G22760 29.167 5.06e-08 48.9