Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1930 ATGACTTCAGTCGTGAAGATCGATGGCGAACATCTTCTCGCCAACGATCTTCAGGATTGTTCTCTCAATGATAAGAGTGAAATGCGAAGTGAAGCAGAGATTCTTCCGGTGGGATCTGAGAACCATGGGGGAATCTGTGCCATTTGCTTGGATAAGATAGTACTTCAGGAAACTGCGCTCGTTAAAGGTTGCGAGCATGCTTACTGTGTAACATGCATTCTTCAGTGGGCCACATATCGGCCGAAGGCCACCTGTCCGCAATGTAAACATCCATTTGAGTTTCTTAATGTCCATCGCTCTCTTGATGGCAGGCTTCATGACTATTTGTTTGAGGAAAGTGTCTGCCTCCTTCTTAGAGCTTCATGGTTTAAACCTTTAAGTGTAGAAGATCATGCTGAGCATGAAGAGGTGTATGTGTATGATGAGCTTGAAGATTATTATTATGGTTATGAGGATGAGGAAGATGACTTAGATGAAGCCTATTATGGTGGCTCATCAAGCATCCGCATTGGCAACCGGAGATGGGGAGATAATGGCTATGTTAGGGCTGGTCGGCAACAAGCTAGGCCAGTCCACCATCAACCTGGCTCCCAGAACTCAGGGGCTAGCTCATCCCGTGAGCCAAAGAACAAAGAGGTTGTCAAAGGTGCTACAACTGGACGGCGAGCAAAGCGAGCACTGAAACGGGAGGCGGCTGATAAGGCTGCTGCGGCAAAGCATCAGCAGCATCTAGTGAGGTTGGGAAGGAAGTGA 753 0.4768 MTSVVKIDGEHLLANDLQDCSLNDKSEMRSEAEILPVGSENHGGICAICLDKIVLQETALVKGCEHAYCVTCILQWATYRPKATCPQCKHPFEFLNVHRSLDGRLHDYLFEESVCLLLRASWFKPLSVEDHAEHEEVYVYDELEDYYYGYEDEEDDLDEAYYGGSSSIRIGNRRWGDNGYVRAGRQQARPVHHQPGSQNSGASSSREPKNKEVVKGATTGRRAKRALKREAADKAAAAKHQQHLVRLGRK 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1930 250 MobiDBLite consensus disorder prediction 184 250 - -
Mibi05g1930 250 MobiDBLite consensus disorder prediction 208 240 - -
Mibi05g1930 250 Pfam Ring finger domain 46 89 IPR001841 -
Mibi05g1930 250 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 250 - -
Mibi05g1930 250 MobiDBLite consensus disorder prediction 191 207 - -
Mibi05g1930 250 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 24 108 IPR013083 -
Mibi05g1930 250 SUPERFAMILY RING/U-box 45 95 - -
Mibi05g1930 250 ProSiteProfiles Zinc finger RING-type profile. 46 89 IPR001841 -
Mibi05g1930 250 ProSitePatterns Zinc finger RING-type signature. 64 73 IPR017907 -
Mibi05g1930 250 SMART ring_2 46 88 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1930 1 250 C3H Transcription Factor Family AT5G19430 55.039 7.30e-88 259